RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CYB561P49447 251 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 ZNF140P52738 457 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-236ENST00000556220 UBASH3AP57075 661 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 CORO7P57737 925 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 TAS2R50P59544 299 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 MAT1AQ00266 395 aaKnown RBP6.4□□□□□ -1.38
ATXN3-236ENST00000556220 KLHL30Q0D2K2 578 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 FBXW10Q5XX13 1052 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 LRRC8BQ6P9F7 803 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 PRSS57Q6UWY2 283 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 RANBP10Q6VN20 620 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 B3GNT6Q6ZMB0 384 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 C16orf47Q6ZP98 133 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-236ENST00000556220 TAS2R42Q7RTR8 314 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 PID1Q7Z2X4 250 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 WDR53Q7Z5U6 358 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-236ENST00000556220 ANKRD37Q7Z713 158 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 RPS19BP1Q86WX3 136 aaKnown RBP6.4□□□□□ -1.38
ATXN3-236ENST00000556220 VSIG1Q86XK7 387 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 P3H2Q8IVL5 708 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 ARHGEF39Q8N4T4 335 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 TMEM158Q8WZ71 300 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 TMEM125Q96AQ2 219 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 CHP1Q99653 195 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 ZFYVE21Q9BQ24 234 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 FSD1LQ9BXM9 530 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 GP6Q9HCN6 339 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 PNPLA3Q9NST1 481 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 SMARCAL1Q9NZC9 954 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 KLHL8Q9P2G9 620 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-236ENST00000556220 Q9UFV3 132 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 CIDEBQ9UHD4 219 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 SLC39A10Q9ULF5 831 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 NENFQ9UMX5 172 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 RUVBL1Q9Y265 456 aaKnown RBP6.4□□□□□ -1.38
ATXN3-236ENST00000556220 SF3B6Q9Y3B4 125 aaKnown RBP6.4□□□□□ -1.38
ATXN3-236ENST00000556220 ZC3H12DA2A288 527 aaKnown RBP6.39□□□□□ -1.39
ATXN3-236ENST00000556220 OR2W5A6NFC9 320 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 C3orf70A6NLC5 250 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-236ENST00000556220 QSOX1O00391 747 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 PEX1O43933 1283 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 RPN2P04844 631 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 DBHP09172 617 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 CD247P20963 164 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 UQCRC1P31930 480 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 NR2C2P49116 596 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 AGTR2P50052 363 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 HLCSP50747 726 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 NR0B1P51843 470 aaKnown RBP6.39□□□□□ -1.39
ATXN3-236ENST00000556220 MLF1P58340 268 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 ACTN3Q08043 901 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-236ENST00000556220 FAM53BQ14153 422 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 MESDQ14696 234 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 ASTE1Q2TB18 679 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-236ENST00000556220 HKDC1Q2TB90 917 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 MINDY4Q4G0A6 757 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 SYTL3Q4VX76 610 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 Q5PR19 223 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 RTL6Q6ICC9 239 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 HMBOX1Q6NT76 420 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 ZNF585AQ6P3V2 769 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 MICALCLQ6ZW33 695 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 BZW1Q7L1Q6 419 aaKnown RBP6.39□□□□□ -1.39
ATXN3-236ENST00000556220 DCUN1D3Q8IWE4 304 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 LRRC8AQ8IWT6 810 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 REXO1L1PQ8IX06 675 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 PIANPQ8IYJ0 282 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 ZNF567Q8N184 647 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 LRRC75A-AS1Q8N1F1 130 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 CSNK1A1LQ8N752 337 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 ZFP62Q8NB50 900 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-236ENST00000556220 OR2L3Q8NG85 312 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 OR5M9Q8NGP3 310 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 CFAP61Q8NHU2 1237 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 ELP5Q8TE02 316 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 CREB3L4Q8TEY5 395 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 TFB1MQ8WVM0 346 aaKnown RBP6.39□□□□□ -1.39
ATXN3-236ENST00000556220 Q96MF0 132 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 SECISBP2Q96T21 854 aaKnown RBP6.39□□□□□ -1.39
ATXN3-236ENST00000556220 VAT1Q99536 393 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 DRC3Q9H069 523 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 DEFB127Q9H1M4 99 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 ZKSCAN5Q9Y2L8 839 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 KLF13Q9Y2Y9 288 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-236ENST00000556220 FAM215AQ9Y5M1 114 aa6.39□□□□□ -1.39
ATXN3-236ENST00000556220 PHF3Q92576 2039 aaKnown RBP6.38□□□□□ -1.39
ATXN3-236ENST00000556220 A0A1W2PPV9 198 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 LRRD1A4D1F6 860 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 SMTNL1A8MU46 457 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 FAM47E-STBD1D6RA91 191 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 H0YIG0 161 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 H7C0S8 307 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 BCKDKO14874 412 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 VPS26AO75436 327 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 GPC4O75487 556 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 CELA3BP08861 270 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 OR56A5P0C7T3 313 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 PSMB5P28074 263 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 ADRA1AP35348 466 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 AVPR1BP47901 424 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms