RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 KRT12Q99456 494 aa20.22■□□□□ 0.83
SDR39U1-216ENST00000556175 MCMBPQ9BTE3 642 aa20.22■□□□□ 0.83
SDR39U1-216ENST00000556175 NPLQ9BXD5 320 aaPredicted RBP20.22■□□□□ 0.83
SDR39U1-216ENST00000556175 HES7Q9BYE0 225 aa20.22■□□□□ 0.83
SDR39U1-216ENST00000556175 SH3BGRL2Q9UJC5 107 aa20.22■□□□□ 0.83
SDR39U1-216ENST00000556175 SNX24Q9Y343 169 aa20.22■□□□□ 0.83
SDR39U1-216ENST00000556175 CTAGE15A4D2H0 777 aa20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 ESRRAP11474 423 aaPredicted RBP20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 MLF1P58340 268 aa20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 BTN3A2P78410 334 aa20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 SLBPQ14493 270 aaKnown RBP eCLIP20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 TGFBIQ15582 683 aa20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 CDKL4Q5MAI5 379 aa20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 CTAGE6Q86UF2 777 aa20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 KIF2BQ8N4N8 673 aa20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 DEFB126Q9BYW3 111 aa20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 EHD1Q9H4M9 534 aa20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 NT5DC2Q9H857 520 aa20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 TRIM45Q9H8W5 580 aaPredicted RBP20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 WWOXQ9NZC7 414 aa20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 MRPS33Q9Y291 106 aaKnown RBP20.21■□□□□ 0.83
SDR39U1-216ENST00000556175 NCF1BA6NI72 391 aaPredicted RBP20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 NCF1CA8MVU1 366 aaPredicted RBP20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 NPIPA5E9PKD4 350 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 EIF3HO15372 352 aaKnown RBP eCLIP20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 NME2P1O60361 137 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 NCF1P14598 390 aaPredicted RBP20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 NME2P22392 152 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 TRHRP34981 398 aaPredicted RBP20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 GDF5P43026 501 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 CLCN2P51788 898 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 ATP6V0D1P61421 351 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 MAPKAPK3Q16644 382 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 BNC2Q6ZN30 1099 aaPredicted RBP20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 CAPN12Q6ZSI9 719 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 ARMC10Q8N2F6 343 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 NFAM1Q8NET5 270 aaPredicted RBP20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 B3GNT7Q8NFL0 401 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 CCT6BQ92526 530 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 CHST11Q9NPF2 352 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 NECTIN3Q9NQS3 549 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 WHRNQ9P202 907 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 NPIPA1Q9UND3 350 aa20.2■□□□□ 0.82
SDR39U1-216ENST00000556175 FAM187AA6NFU0 413 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 ANKDD1BA6NHY2 528 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 C4orf51C9J302 202 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 CLDN4O14493 209 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 CLGNO14967 610 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 ERI3O43414 337 aaKnown RBP20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 B3GALT2O43825 422 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 CLEC3AO75596 197 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 ZNF24P17028 368 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 GGT5P36269 586 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 ST13P50502 369 aaKnown RBP20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 HLCSP50747 726 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 SMSP52788 366 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 HSD17B7P56937 341 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 RCN2Q14257 317 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 TRIM40Q6P9F5 258 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 XKRXQ6PP77 449 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 MAATS1Q7Z4T9 603 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 GPSM1Q86YR5 675 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 POGLUT1Q8NBL1 392 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 MS4A6EQ96DS6 147 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 CPNE1Q99829 537 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 DNAJC11Q9NVH1 559 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 ZNF835Q9Y2P0 537 aa20.19■□□□□ 0.82
SDR39U1-216ENST00000556175 LRIT2A6NDA9 550 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 WISP3O95389 354 aaPredicted RBP20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 CCDC166P0CW27 439 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 STMN1P16949 149 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 AGAP20933 346 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 RAB38P57729 211 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 TGM3Q08188 693 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 C3AR1Q16581 482 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 C18orf21Q32NC0 220 aaPredicted RBP20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 ZNF468Q5VIY5 522 aaPredicted RBP20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 SULT1C3Q6IMI6 304 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 Q6ZPB1 254 aaPredicted RBP20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 SPPL2CQ8IUH8 684 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 SIAH3Q8IW03 269 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 SCUBE1Q8IWY4 988 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 GHDCQ8N2G8 530 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 PDLIM2Q96JY6 352 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 RBBP8Q99708 897 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 ERP44Q9BS26 406 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 EFCAB11Q9BUY7 163 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 REXO4Q9GZR2 422 aaKnown RBP20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 AICDAQ9GZX7 198 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 TSPAN10Q9H1Z9 355 aaPredicted RBP20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 SAYSD1Q9NPB0 183 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 PRTFDC1Q9NRG1 225 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 SMYD2Q9NRG4 433 aa20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 KLF13Q9Y2Y9 288 aaPredicted RBP20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 MTO1Q9Y2Z2 717 aaKnown RBP20.18■□□□□ 0.82
SDR39U1-216ENST00000556175 TRBV11-1A0A0K0K1C0 115 aa20.17■□□□□ 0.82
SDR39U1-216ENST00000556175 A8MUA0 341 aa20.17■□□□□ 0.82
SDR39U1-216ENST00000556175 ASNA1O43681 348 aa20.17■□□□□ 0.82
SDR39U1-216ENST00000556175 STK16O75716 305 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms