RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 HSF1Q00613 529 aa17.59■□□□□ 0.41
CDKN3-209ENST00000556102 ZNF460Q14592 562 aa17.59■□□□□ 0.41
CDKN3-209ENST00000556102 TERF2Q15554 542 aa17.59■□□□□ 0.41
CDKN3-209ENST00000556102 ZC3HC1Q86WB0 502 aaKnown RBP17.59■□□□□ 0.41
CDKN3-209ENST00000556102 APCDD1LQ8NCL9 501 aa17.59■□□□□ 0.41
CDKN3-209ENST00000556102 B3GNT7Q8NFL0 401 aa17.59■□□□□ 0.41
CDKN3-209ENST00000556102 AGAP11Q8TF27 550 aa17.59■□□□□ 0.41
CDKN3-209ENST00000556102 PHF10Q8WUB8 498 aaKnown RBP17.59■□□□□ 0.41
CDKN3-209ENST00000556102 GAL3ST3Q96A11 431 aa17.59■□□□□ 0.41
CDKN3-209ENST00000556102 LURAP1Q96LR2 239 aa17.59■□□□□ 0.41
CDKN3-209ENST00000556102 KLF13Q9Y2Y9 288 aaPredicted RBP17.59■□□□□ 0.41
CDKN3-209ENST00000556102 ASB1Q9Y576 335 aa17.59■□□□□ 0.41
CDKN3-209ENST00000556102 E9PLN8 166 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 ZNHIT1O43257 154 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 GNAZP19086 355 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 CLCN2P51788 898 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 TAS2R39P59534 338 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 CDSNQ15517 529 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 FRA10AC1Q70Z53 315 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 ADAMTSL2Q86TH1 951 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 DOLPP1Q86YN1 238 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.58■□□□□ 0.4
CDKN3-209ENST00000556102 KLHDC8AQ8IYD2 350 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 EID3Q8N140 333 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 TTLQ8NG68 377 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 PDLIM2Q96JY6 352 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 FAR2Q96K12 515 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 RUNDC3BQ96NL0 473 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 VKORC1Q9BQB6 163 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 NPLQ9BXD5 320 aaPredicted RBP17.58■□□□□ 0.4
CDKN3-209ENST00000556102 CTNNAL1Q9UBT7 734 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 CSMD2Q7Z408 3487 aa17.58■□□□□ 0.4
CDKN3-209ENST00000556102 ADGRG4Q8IZF6 3080 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 TRBV11-1A0A0K0K1C0 115 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 C19orf84I3L1E1 186 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 PRRG2O14669 202 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 H2AFYO75367 372 aaKnown RBP17.57■□□□□ 0.4
CDKN3-209ENST00000556102 MYO1DO94832 1006 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 WDR47O94967 919 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 C1GALT1C1LP0DN25 315 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 PTGER1P34995 402 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 SLC6A12P48065 614 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 MEOX1P50221 254 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 BTN3A2P78410 334 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 TSNQ15631 228 aaKnown RBP17.57■□□□□ 0.4
CDKN3-209ENST00000556102 SLCO4C1Q6ZQN7 724 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 NCCRP1Q6ZVX7 275 aaPredicted RBP17.57■□□□□ 0.4
CDKN3-209ENST00000556102 FGD2Q7Z6J4 655 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 ANKMY2Q8IV38 441 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 SCUBE1Q8IWY4 988 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 KLHL7Q8IXQ5 586 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 RHBDF1Q96CC6 855 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 VPS39Q96JC1 886 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 DMRTA2Q96SC8 542 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 MOCS1Q9NZB8 636 aa17.57■□□□□ 0.4
CDKN3-209ENST00000556102 PPIEQ9UNP9 301 aaKnown RBP17.57■□□□□ 0.4
CDKN3-209ENST00000556102 KLRC4-KLRK1H3BQV0 150 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 ADAM10O14672 748 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 TFECO14948 347 aaPredicted RBP17.56■□□□□ 0.4
CDKN3-209ENST00000556102 SEC31AO94979 1220 aaKnown RBP17.56■□□□□ 0.4
CDKN3-209ENST00000556102 GSTM2P28161 218 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 HNRNPH1P31943 449 aaKnown RBP17.56■□□□□ 0.4
CDKN3-209ENST00000556102 DR1Q01658 176 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 RUNX2Q13950 521 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 SLBPQ14493 270 aaKnown RBP eCLIP17.56■□□□□ 0.4
CDKN3-209ENST00000556102 C18orf21Q32NC0 220 aaPredicted RBP17.56■□□□□ 0.4
CDKN3-209ENST00000556102 TMIGD1Q6UXZ0 262 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 SULF2Q8IWU5 870 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 ZNF295-AS1Q8N0V1 137 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 CYP4Z2PQ8N1L4 340 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 FBXO36Q8NEA4 188 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 ANKRD49Q8WVL7 239 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 CCT6BQ92526 530 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 MS4A6EQ96DS6 147 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 VMP1Q96GC9 406 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 SEC16BQ96JE7 1060 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 CAPZA3Q96KX2 299 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 POPDC3Q9HBV1 291 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 PRTFDC1Q9NRG1 225 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 TRMT1Q9NXH9 659 aaKnown RBP17.56■□□□□ 0.4
CDKN3-209ENST00000556102 NSMCE4AQ9NXX6 385 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 FBXW2Q9UKT8 454 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 TACC2O95359 2948 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 CCDC168Q8NDH2 2452 aa17.56■□□□□ 0.4
CDKN3-209ENST00000556102 F8P00451 2351 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 A0A088AWK7 358 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 A0A0G2JN53 185 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 LRIT2A6NDA9 550 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 ERI3O43414 337 aaKnown RBP17.55■□□□□ 0.4
CDKN3-209ENST00000556102 PEX1O43933 1283 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 ITGA10O75578 1167 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 POU3F2P20265 443 aaPredicted RBP17.55■□□□□ 0.4
CDKN3-209ENST00000556102 ZNF10P21506 573 aaPredicted RBP17.55■□□□□ 0.4
CDKN3-209ENST00000556102 SSTR2P30874 369 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 GDF5P43026 501 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 KIR3DL1P43629 444 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 HSD17B7P56937 341 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 RAB38P57729 211 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 PDIA2Q13087 525 aaKnown RBP17.55■□□□□ 0.4
CDKN3-209ENST00000556102 FASTKD3Q14CZ7 662 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms