RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 MPZL2O60487 215 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 EFCAB14O75071 495 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 CNOT3O75175 753 aaKnown RBP6.71□□□□□ -1.34
TDP1-213ENST00000555880 RFPL2O75678 378 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 KRT75O95678 551 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 FGF19O95750 216 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 VIPP01282 170 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 OPN1SWP03999 348 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 RPLP0P05388 317 aaKnown RBP6.71□□□□□ -1.34
TDP1-213ENST00000555880 CDK1P06493 297 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 ADH1AP07327 375 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 CLTBP09497 229 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 ETFAP13804 333 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 TYRP14679 529 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 SOAT1P35610 550 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 CDC42P60953 191 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 RPS3AP61247 264 aaKnown RBP6.71□□□□□ -1.34
TDP1-213ENST00000555880 TBPL1P62380 186 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 HBA1P69905 142 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 DNASE1L3Q13609 305 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 SLBPQ14493 270 aaKnown RBP eCLIP6.71□□□□□ -1.34
TDP1-213ENST00000555880 MAPK11Q15759 364 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 SYT16Q17RD7 645 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 MICAQ29983 383 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 ZNF630Q2M218 657 aaPredicted RBP6.71□□□□□ -1.34
TDP1-213ENST00000555880 EXOC3L2Q2M3D2 409 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 ZNF181Q2M3W8 571 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 IQCCQ4KMZ1 466 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 ARHGAP15Q53QZ3 475 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 ZNF648Q5T619 568 aaPredicted RBP6.71□□□□□ -1.34
TDP1-213ENST00000555880 C1orf53Q5VUE5 145 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 SLCO4C1Q6ZQN7 724 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 COMMD6Q7Z4G1 85 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 FAM124AQ86V42 546 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 TAGAPQ8N103 731 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 OR52N2Q8NGI0 321 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 OR52J3Q8NH60 311 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 RHOXF1Q8NHV9 184 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 NFKBIDQ8NI38 313 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 PRR7Q8TB68 274 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 UTP15Q8TED0 518 aaKnown RBP6.71□□□□□ -1.34
TDP1-213ENST00000555880 PROX1Q92786 737 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 IRF7Q92985 503 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 UBE2FQ969M7 185 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 NEIL2Q969S2 332 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 UBE2E3Q969T4 207 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 MTERF3Q96E29 417 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 CRELD1Q96HD1 420 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 COL21A1Q96P44 957 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 OR4K3Q96R72 315 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 SIGLEC11Q96RL6 698 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 PSD2Q9BQI7 771 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 SLIRPQ9GZT3 109 aaKnown RBP6.71□□□□□ -1.34
TDP1-213ENST00000555880 C6orf62Q9GZU0 229 aaPredicted RBP6.71□□□□□ -1.34
TDP1-213ENST00000555880 EHD1Q9H4M9 534 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 TMEM38AQ9H6F2 299 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 ZBTB20Q9HC78 741 aaPredicted RBP6.71□□□□□ -1.34
TDP1-213ENST00000555880 ATP13A2Q9NQ11 1180 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 THSD1Q9NS62 852 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 IL36AQ9UHA7 158 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 ITGB1BP2Q9UKP3 347 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 DUSP12Q9UNI6 340 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 ERVK-11Q9UQG0 969 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 ZNF451Q9Y4E5 1061 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 A3GALT2U3KPV4 340 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 PMF1-BGLAPU3KQ54 211 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 BRCA2P51587 3418 aa6.71□□□□□ -1.34
TDP1-213ENST00000555880 LOC100506127A0A0U1RQW1 187 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 ABHD14A-ACY1A0A1B0GW23 586 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 TSPAN11A1L157 253 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 PIPSLA2A3N6 862 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 EFCAB10A6NFE3 127 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 E9PQ18 207 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 GPR37L1O60883 481 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 TNFRSF21O75509 655 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CCNB2O95067 398 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 C6orf47O95873 294 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 HLA-EP13747 358 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 TIMP2P16035 220 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 DDX5P17844 614 aaKnown RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 TGM1P22735 817 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 GADD45AP24522 165 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 DDX6P26196 483 aaKnown RBP eCLIP6.7□□□□□ -1.34
TDP1-213ENST00000555880 SOX6P35712 828 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 LIPAP38571 399 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 PIK3CBP42338 1070 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 MAGEA8P43361 318 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CTSCP53634 463 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CRYBA2P53672 197 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CDK6Q00534 326 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 C2orf80Q0P641 193 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 TMEM115Q12893 351 aaPredicted RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 KRR1Q13601 381 aaKnown RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 STARD3Q14849 445 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 EIF4HQ15056 248 aaKnown RBP6.7□□□□□ -1.34
TDP1-213ENST00000555880 TIMM50Q3ZCQ8 353 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 CCSMST1Q4G0I0 132 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 ZNF805Q5CZA5 627 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 COX20Q5RI15 118 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 PDE4DIPQ5VU43 2346 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms