RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 VTNP04004 478 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 GSTA2P09210 222 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 NUDT17P0C025 328 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 SKILP12757 684 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 CEACAM1P13688 526 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 SOX3P41225 446 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 CLCN4P51793 760 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 XGP55808 180 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 OR1D5P58170 312 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 SNRPD1P62314 119 aaKnown RBP4.68□□□□□ -1.66
VRK1-205ENST00000555402 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 ATP1A1-AS1Q5TC04 95 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 B3GLCTQ6Y288 498 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 RFPL4BQ6ZWI9 263 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 MIER3Q7Z3K6 550 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 FBXW8Q8N3Y1 598 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 TRIM58Q8NG06 486 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 OR13C5Q8NGS8 318 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 SPATA18Q8TC71 538 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 AZIN2Q96A70 460 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 ZNF274Q96GC6 653 aaPredicted RBP4.68□□□□□ -1.66
VRK1-205ENST00000555402 TDRD1Q9BXT4 1180 aaKnown RBP4.68□□□□□ -1.66
VRK1-205ENST00000555402 UBQLN2Q9UHD9 624 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 PSORS1C1Q9UIG5 152 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 PLCL2Q9UPR0 1127 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 EXOC7Q9UPT5 735 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 ETV7Q9Y603 341 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
VRK1-205ENST00000555402 SLC9B1P1A6NJY1 282 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 TLR4O00206 839 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 SYT7O43581 403 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 MAGEC1O60732 1142 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 PATE4P0C8F1 98 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 CCDC192P0DO97 292 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 ZNF18P17022 549 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 ANOS1P23352 680 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 GJB2P29033 226 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 CDKN1AP38936 164 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 LEPRP48357 1165 aaKnown RBP4.67□□□□□ -1.66
VRK1-205ENST00000555402 LUMP51884 338 aaPredicted RBP4.67□□□□□ -1.66
VRK1-205ENST00000555402 PAX9P55771 341 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 KCNK10P57789 538 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 PPP1R8Q12972 351 aaKnown RBP4.67□□□□□ -1.66
VRK1-205ENST00000555402 GIT2Q14161 759 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 GRB14Q14449 540 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 EFTUD2Q15029 972 aaKnown RBP eCLIP4.67□□□□□ -1.66
VRK1-205ENST00000555402 KRT31Q15323 416 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 ZNF876PQ49A33 203 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 PARP10Q53GL7 1025 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 LYPLAL1Q5VWZ2 237 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 TCEAL6Q6IPX3 200 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 CD164L2Q6UWJ8 174 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 CHMP1BQ7LBR1 199 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 APLFQ8IW19 511 aaPredicted RBP4.67□□□□□ -1.66
VRK1-205ENST00000555402 CNPY4Q8N129 248 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 ELMOD1Q8N336 334 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 TEX26Q8N6G2 289 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 CCNYQ8ND76 341 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 OR4A16Q8NH70 328 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 EXOC6Q8TAG9 804 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 MAPK15Q8TD08 544 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 GANCQ8TET4 914 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 GATAD1Q8WUU5 269 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 ZNRF4Q8WWF5 429 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 PRCCQ92733 491 aaPredicted RBP4.67□□□□□ -1.66
VRK1-205ENST00000555402 OMA1Q96E52 524 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 DTD2Q96FN9 168 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 ZNF486Q96H40 463 aaPredicted RBP4.67□□□□□ -1.66
VRK1-205ENST00000555402 C2orf48Q96LS8 159 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 GUCD1Q96NT3 240 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 PCDHB18PQ96TA0 734 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 DDX47Q9H0S4 455 aaKnown RBP4.67□□□□□ -1.66
VRK1-205ENST00000555402 SYTL2Q9HCH5 934 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 TRMT6Q9UJA5 497 aaKnown RBP4.67□□□□□ -1.66
VRK1-205ENST00000555402 HOOK1Q9UJC3 728 aaKnown RBP4.67□□□□□ -1.66
VRK1-205ENST00000555402 ERVK-19Q9WJR5 959 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 RPH3AQ9Y2J0 694 aaPredicted RBP4.67□□□□□ -1.66
VRK1-205ENST00000555402 SH3GLB1Q9Y371 365 aa4.67□□□□□ -1.66
VRK1-205ENST00000555402 TRBV2A0A0J9YWF9 115 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 MAGEB2O15479 319 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 SLC4A1P02730 911 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 ODC1P11926 461 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 B4GALT1P15291 398 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 AREGP15514 252 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 MAPK3P27361 379 aaPredicted RBP4.66□□□□□ -1.66
VRK1-205ENST00000555402 STIP1P31948 543 aaKnown RBP4.66□□□□□ -1.66
VRK1-205ENST00000555402 BTG1P62324 171 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 CSNK2BP67870 215 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 CNTN1Q12860 1018 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 SRSF9Q13242 221 aaKnown RBP eCLIP4.66□□□□□ -1.66
VRK1-205ENST00000555402 TSTA3Q13630 321 aaPredicted RBP4.66□□□□□ -1.66
VRK1-205ENST00000555402 GK2Q14410 553 aaPredicted RBP4.66□□□□□ -1.66
VRK1-205ENST00000555402 SMC1AQ14683 1233 aaKnown RBP4.66□□□□□ -1.66
VRK1-205ENST00000555402 PDK1Q15118 436 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 SGSM1Q2NKQ1 1148 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 ZNF776Q68DI1 518 aaPredicted RBP4.66□□□□□ -1.66
VRK1-205ENST00000555402 ADAM5Q6NVV9 412 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 TMEM64Q6YI46 380 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 Q6ZSR9 355 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 STHQ8IWL8 128 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms