RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 C18orf21Q32NC0 220 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 FAM45BPQ6NSW5 357 aa11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 NIPAL1Q6NVV3 410 aa11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 ABHD13Q7L211 337 aa11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 GHDCQ8N2G8 530 aa11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 TRPV3Q8NET8 790 aa11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 GABPB2Q8TAK5 448 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 FAM45AQ8TCE6 357 aa11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 AGAP11Q8TF27 550 aa11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 ANKRD49Q8WVL7 239 aa11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 MTFMTQ96DP5 389 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 MAGED4Q96JG8 741 aa11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 PRDM9Q9NQV7 894 aa11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 ZNF223Q9UK11 482 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 PPIEQ9UNP9 301 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 CHMP2BQ9UQN3 213 aa11.42□□□□□ -0.58
MTHFD1-207ENST00000554677 GOLGA6L10A0A0M3HER8 536 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 MLYCDO95822 493 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 PTGER1P34995 402 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 GDF5P43026 501 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 NR0B1P51843 470 aaKnown RBP11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 HNRNPFP52597 415 aaKnown RBP11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 ITGA8P53708 1063 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 TAS2R39P59534 338 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 KRTAP10-9P60411 292 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 SKP1P63208 163 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 CDKL1Q00532 357 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 FRG1Q14331 258 aaKnown RBP11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 ZNF460Q14592 562 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 RBBP5Q15291 538 aaKnown RBP11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 TOR1AIP1Q5JTV8 583 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 C3P1Q6ZMU1 363 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 SLCO4C1Q6ZQN7 724 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 TMPRSS11BQ86T26 416 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 ZC3HC1Q86WB0 502 aaKnown RBP11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 SULF2Q8IWU5 870 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 SCUBE1Q8IWY4 988 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 KLHDC8AQ8IYD2 350 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 TBC1D19Q8N5T2 526 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 FAM98AQ8NCA5 519 aaKnown RBP11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 TMEM52Q8NDY8 209 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 PHF10Q8WUB8 498 aaKnown RBP11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 ANKRD7Q92527 254 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 CFAP36Q96G28 342 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 AIF1LQ9BQI0 150 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 MCMBPQ9BTE3 642 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 RHBGQ9H310 441 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 PPANQ9NQ55 473 aaKnown RBP11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 MOCS1Q9NZB8 636 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 KCNE2Q9Y6J6 123 aa11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 SETD2Q9BYW2 2564 aaPredicted RBP11.41□□□□□ -0.58
MTHFD1-207ENST00000554677 MPDZO75970 2070 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 NPEPPSL1A6NEC2 478 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 URADA6NGE7 173 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 TMEM200CA6NKL6 621 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 E9PLN8 166 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 PRKNO60260 465 aaPredicted RBP11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 PRAMEF4O60810 478 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 WISP3O95389 354 aaPredicted RBP11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 C1GALT1C1LP0DN25 315 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 ZNF24P17028 368 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 PPP2R1BP30154 601 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 HNRNPH1P31943 449 aaKnown RBP11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 SLC6A12P48065 614 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 MEOX1P50221 254 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 BTN3A2P78410 334 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 MORF4L2Q15014 288 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 PRAMEF9Q5VWM5 478 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 MDGA2Q7Z553 956 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 CEP97Q8IW35 865 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 PDIK1LQ8N165 341 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 B3GNT7Q8NFL0 401 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 C16orf52Q8NHV5 167 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 RHBDF1Q96CC6 855 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 LRRC39Q96DD0 335 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 MS4A6EQ96DS6 147 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 PDLIM2Q96JY6 352 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 QRFPRQ96P65 431 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 TREX2Q9BQ50 279 aaPredicted RBP11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 VKORC1Q9BQB6 163 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 DEFB126Q9BYW3 111 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 ENKD1Q9H0I2 346 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 GPAMQ9HCL2 828 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 DYRK1BQ9Y463 629 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 MMACHCQ9Y4U1 282 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 OARD1Q9Y530 152 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 NCKAP5O14513 1909 aa11.4□□□□□ -0.58
MTHFD1-207ENST00000554677 MTORP42345 2549 aa11.39□□□□□ -0.59
MTHFD1-207ENST00000554677 A0A0G2JN53 185 aa11.39□□□□□ -0.59
MTHFD1-207ENST00000554677 A0A1B0GTH9 108 aa11.39□□□□□ -0.59
MTHFD1-207ENST00000554677 LRIT2A6NDA9 550 aa11.39□□□□□ -0.59
MTHFD1-207ENST00000554677 TAPBPO15533 448 aa11.39□□□□□ -0.59
MTHFD1-207ENST00000554677 PEX1O43933 1283 aa11.39□□□□□ -0.59
MTHFD1-207ENST00000554677 MYO1DO94832 1006 aa11.39□□□□□ -0.59
MTHFD1-207ENST00000554677 ABOP16442 354 aa11.39□□□□□ -0.59
MTHFD1-207ENST00000554677 SAT1P21673 171 aa11.39□□□□□ -0.59
MTHFD1-207ENST00000554677 RFC3P40938 356 aa11.39□□□□□ -0.59
MTHFD1-207ENST00000554677 CLCN2P51788 898 aa11.39□□□□□ -0.59
MTHFD1-207ENST00000554677 MGAT5Q09328 741 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms