RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 BMPR2Q13873 1038 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 SEMA3AQ14563 771 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 CCNG2Q16589 344 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 KCTD19Q17RG1 926 aaPredicted RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 GPR33Q49SQ1 333 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 CCDC38Q502W7 563 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 TAF1BQ53T94 588 aaPredicted RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 ZRANB3Q5FWF4 1079 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 DNTTIP2Q5QJE6 756 aaKnown RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 DCAF12Q5T6F0 453 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 CACHD1Q5VU97 1274 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 ICE2Q659A1 982 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 IRGCQ6NXR0 463 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 AFTPHQ6ULP2 937 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 CEACAM20Q6UY09 585 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 PACS1Q6VY07 963 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 CERS6Q6ZMG9 384 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 PPP1R21Q6ZMI0 780 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 FAM92BQ6ZTR7 304 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 TIPARPQ7Z3E1 657 aaKnown RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 LINC00523Q86TU6 105 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 OOSP2Q86WS3 158 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 SRRM1Q8IYB3 904 aaKnown RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 CACNA2D3Q8IZS8 1091 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 RASGEF1CQ8N431 466 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 FAM109AQ8N4B1 249 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 PRELID2Q8N945 189 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 TRIM58Q8NG06 486 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 DPF1Q92782 380 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 PEX13Q92968 403 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 LRRC45Q96CN5 670 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 DCUN1D1Q96GG9 259 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 SLC41A2Q96JW4 573 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 C12orf66Q96MD2 445 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 PPM1MQ96MI6 270 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 ZNF778Q96MU6 729 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 ALS2CR12Q96Q35 445 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 TEFMQ96QE5 360 aaKnown RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 CD180Q99467 661 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 NRTNQ99748 197 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 MAP3K3Q99759 626 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 ZPBPQ9BS86 351 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 SLC29A3Q9BZD2 475 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 TWSG1Q9GZX9 223 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 KIR3DX1Q9H7L2 352 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 LZTFL1Q9NQ48 299 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 EIF2B3Q9NR50 452 aaKnown RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 PAK5Q9P286 719 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 SLC24A2Q9UI40 661 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 PILRAQ9UKJ1 303 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 POMT2Q9UKY4 750 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 ACSL5Q9ULC5 683 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 RIMKLBQ9ULI2 386 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 ZNF148Q9UQR1 794 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 PPP2R2CQ9Y2T4 447 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 ZNF462Q96JM2 2506 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 PIEZO2Q9H5I5 2752 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 CFAP46Q8IYW2 2715 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 IGHV5-51A0A0C4DH38 117 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 C17orf113A0A1B0GUU1 675 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 TCRBV7S3A2A0A539 114 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 SLC5A10A0PJK1 596 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 HEATR9A2RTY3 570 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 OR5K3A6NET4 321 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 TLCD2A6NGC4 264 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 DNAJC9-AS1A6NH13 148 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 EIF4E1BA6NMX2 242 aaKnown RBP4□□□□□ -1.77
VTI1B-203ENST00000554636 E7EVH7 732 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 H0YIZ8 118 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 POLR1CO15160 346 aaPredicted RBP4□□□□□ -1.77
VTI1B-203ENST00000554636 AKAP10O43572 662 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 CEP104O60308 925 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 OR1I1O60431 355 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 TMEM63AO94886 807 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 AP2A2O94973 939 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 POLBP06746 335 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 APRTP07741 180 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 RALBP11234 206 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 FGF5P12034 268 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 FOLR1P15328 257 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 ITGB6P18564 788 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 NELFEP18615 380 aaKnown RBP4□□□□□ -1.77
VTI1B-203ENST00000554636 TPSB2P20231 275 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 F8A1P23610 371 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 ADRA1DP25100 572 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 ACADLP28330 430 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 PDHA2P29803 388 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 NSG1P42857 185 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 MAGEA6P43360 314 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 KCNJ1P48048 391 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 CD151P48509 253 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 ALDH9A1P49189 494 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 LMAN1P49257 510 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 CYP4F2P78329 520 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 CRADDP78560 199 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 FOXM1Q08050 763 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 FOXF2Q12947 444 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 RPA4Q13156 261 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 LY6DQ14210 128 aa4□□□□□ -1.77
VTI1B-203ENST00000554636 KCNJ11Q14654 390 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms