RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 CDC7O00311 574 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 UBFD1O14562 309 aaKnown RBP11.83□□□□□ -0.52
SHMT2-214ENST00000554604 JUNP05412 331 aaKnown RBP11.83□□□□□ -0.52
SHMT2-214ENST00000554604 PIK3R1P27986 724 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 CDC16Q13042 620 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 PFKFB4Q16877 469 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 ICE2Q659A1 982 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 FRMPD2BQ6IN97 320 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 NET1Q7Z628 596 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-214ENST00000554604 MRGPREQ86SM8 312 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 SCUBE1Q8IWY4 988 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 FBXO15Q8NCQ5 510 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-214ENST00000554604 PPFIBP2Q8ND30 876 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 FBXO27Q8NI29 283 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 RP9Q8TA86 221 aaKnown RBP11.83□□□□□ -0.52
SHMT2-214ENST00000554604 MCOLN3Q8TDD5 553 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 ZNF483Q8TF39 744 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-214ENST00000554604 ZNF480Q8WV37 535 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 EEF1AKMT1Q8WVE0 214 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 ZFYVE21Q9BQ24 234 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 RNPEPL1Q9HAU8 725 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 NUDT4Q9NZJ9 180 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 ANKMY1Q9P2S6 941 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 PCDHGA9Q9Y5G4 932 aaKnown RBP11.83□□□□□ -0.52
SHMT2-214ENST00000554604 ASH1LQ9NR48 2969 aaKnown RBP11.82□□□□□ -0.52
SHMT2-214ENST00000554604 LOC105369274A0A096LPK9 316 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 LOC102723532A0A0G2JNH3 316 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 HYKKA2RU49 373 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 OR2A25A4D2G3 310 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 PABPN1LA6NDY0 278 aaKnown RBP11.82□□□□□ -0.52
SHMT2-214ENST00000554604 E7ENX8 843 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 NRP2O60462 931 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 CIB2O75838 187 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 IGHEP01854 428 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 EEF1DP29692 281 aaKnown RBP11.82□□□□□ -0.52
SHMT2-214ENST00000554604 ATP4BP51164 291 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 YBX1P67809 324 aaKnown RBP11.82□□□□□ -0.52
SHMT2-214ENST00000554604 IRX1P78414 480 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-214ENST00000554604 TAP2Q03519 686 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 CLCQ05315 142 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 PRDX1Q06830 199 aaKnown RBP11.82□□□□□ -0.52
SHMT2-214ENST00000554604 LCP2Q13094 533 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 ZRSR2Q15696 482 aaKnown RBP11.82□□□□□ -0.52
SHMT2-214ENST00000554604 COLEC12Q5KU26 742 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 C6orf163Q5TEZ5 329 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 KANK2Q63ZY3 851 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 NXNQ6DKJ4 435 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 MRPL14Q6P1L8 145 aaKnown RBP11.82□□□□□ -0.52
SHMT2-214ENST00000554604 CYHR1Q6ZMK1 362 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 RNF44Q7L0R7 432 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 OVCH1Q7RTY7 1134 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 ADCK2Q7Z695 626 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 ADAMTSL2Q86TH1 951 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 GPSM1Q86YR5 675 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 OR4N4Q8N0Y3 316 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 MYO1HQ8N1T3 1032 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 METTL27Q8N6F8 245 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-214ENST00000554604 POU5F2Q8N7G0 328 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 CLEC1AQ8NC01 280 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 RERGQ96A58 199 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-214ENST00000554604 FKBP10Q96AY3 582 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 FER1L6-AS2Q96M78 137 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 ZNF285Q96NJ3 590 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 DCLRE1BQ9H816 532 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 ZBTB26Q9HCK0 441 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 TNFRSF12AQ9NP84 129 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 SLC6A20Q9NP91 592 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 GPR83Q9NYM4 423 aa11.82□□□□□ -0.52
SHMT2-214ENST00000554604 DOPEY2Q9Y3R5 2298 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 LRRK2Q5S007 2527 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 FITM1A5D6W6 292 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 H0YGG7 62 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 AZIN1O14977 448 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 CNOT3O75175 753 aaKnown RBP11.81□□□□□ -0.52
SHMT2-214ENST00000554604 SKAP2O75563 359 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-214ENST00000554604 SIX3O95343 332 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-214ENST00000554604 MLYCDO95822 493 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 ALBP02768 609 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 PDGFAP04085 211 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 C8GP07360 202 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 GCGRP47871 477 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 OR1D4P47884 311 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 ARF3P61204 181 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-214ENST00000554604 ABATP80404 500 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 SQLEQ14534 574 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 MAPRE2Q15555 327 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 MUM1Q2TAK8 710 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 TRMT5Q32P41 509 aaKnown RBP11.81□□□□□ -0.52
SHMT2-214ENST00000554604 UGT3A2Q3SY77 523 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 FBXO42Q6P3S6 717 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 RPS27LQ71UM5 84 aaKnown RBP11.81□□□□□ -0.52
SHMT2-214ENST00000554604 ULK2Q8IYT8 1036 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-214ENST00000554604 COL26A1Q96A83 441 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 PPP1R36Q96LQ0 422 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 THTPAQ9BU02 230 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 WDR54Q9H977 334 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 PARVBQ9HBI1 364 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 MID1IP1Q9NPA3 183 aa11.81□□□□□ -0.52
SHMT2-214ENST00000554604 CCDC177Q9NQR7 707 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms