RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 OR51J1Q9H342 316 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 DDX31Q9H8H2 851 aaKnown RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 GBA2Q9HCG7 927 aaPredicted RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 BTNL2Q9UIR0 455 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 SCP2D1Q9UJQ7 156 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 LSM2Q9Y333 95 aaKnown RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 NPTNQ9Y639 398 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 ZNF236Q9UL36 1845 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 A0A087WZ62 844 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 A0A0U1RQF3 1178 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 PRKRAO75569 313 aaKnown RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 CCNDBP1O95273 360 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 PIGRP01833 764 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 IL6P05231 212 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 GOT1P17174 413 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 PTPN3P26045 913 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 ACSL1P33121 698 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 TRHRP34981 398 aaPredicted RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 FNTBP49356 437 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 RPS7P62081 194 aaKnown RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 RPS8P62241 208 aaKnown RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 DHODHQ02127 395 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 LRRC74AQ0VAA2 488 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 PRKG2Q13237 762 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 SNTB1Q13884 538 aaKnown RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 GPR176Q14439 515 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 CHRNA6Q15825 494 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 SLFN12LQ6IEE8 588 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 APOBEC3HQ6NTF7 200 aaKnown RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 CNIH2Q6PI25 160 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 METAP1DQ6UB28 335 aaPredicted RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 MSRB3Q8IXL7 192 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 FTMTQ8N4E7 242 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 C12orf45Q8N5I9 185 aaPredicted RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 C1orf52Q8N6N3 182 aaKnown RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 OR10Q1Q8NGQ4 319 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 OR1S1Q8NH92 325 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 NETO1Q8TDF5 533 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 ELP5Q8TE02 316 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 PPP3R2Q96LZ3 170 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 MOGAT1Q96PD6 335 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 TSGA13Q96PP4 275 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 OR2M2Q96R28 347 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 PPP1R16BQ96T49 567 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 ACTR6Q9GZN1 396 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 ALG9Q9H6U8 611 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 ANKRA2Q9H9E1 313 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 SEBOXQ9HB31 216 aaPredicted RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 ZDHHC4Q9NPG8 344 aa9.19□□□□□ -0.94
SIX4-202ENST00000554079 EXO1Q9UQ84 846 aaKnown RBP9.19□□□□□ -0.94
SIX4-202ENST00000554079 POM121CA8CG34 1229 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 C2orf74A8MZ97 194 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 MYO1GB0I1T2 1018 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 FAM220BPB1ANY3 271 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 CHURC1-FNTBB4DL54 471 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 D6RAR5 112 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 TEX46H3BTG2 121 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 GPR171O14626 319 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 SIX3O95343 332 aaPredicted RBP9.18□□□□□ -0.94
SIX4-202ENST00000554079 SEMG1P04279 462 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 SYPP08247 313 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 SPP1P10451 314 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 OGNP20774 298 aaKnown RBP9.18□□□□□ -0.94
SIX4-202ENST00000554079 PSMA3P25788 255 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 PTBP1P26599 531 aaKnown RBP eCLIP9.18□□□□□ -0.94
SIX4-202ENST00000554079 BTCP35070 178 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 NOS2P35228 1153 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 SPAM1P38567 509 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 SOX3P41225 446 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 RIDAP52758 137 aaKnown RBP9.18□□□□□ -0.94
SIX4-202ENST00000554079 ATXN1P54253 815 aaKnown RBP9.18□□□□□ -0.94
SIX4-202ENST00000554079 PSMD4P55036 377 aaKnown RBP9.18□□□□□ -0.94
SIX4-202ENST00000554079 ERVK-25P63136 954 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 MXD1Q05195 221 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 PTPN11Q06124 597 aaPredicted RBP9.18□□□□□ -0.94
SIX4-202ENST00000554079 EXOC3L2Q2M3D2 409 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 EIF2S3LQ2VIR3 472 aaKnown RBP9.18□□□□□ -0.94
SIX4-202ENST00000554079 ARHGAP15Q53QZ3 475 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 FAM76BQ5HYJ3 339 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 TEX30Q5JUR7 227 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 FAM74A1Q5RGS3 127 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 GPR153Q6NV75 609 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 WASH2PQ6VEQ5 465 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 TMEM179Q6ZVK1 233 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 RHOUQ7L0Q8 258 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 OTOP2Q7RTS6 562 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 TRMT1LQ7Z2T5 733 aaKnown RBP9.18□□□□□ -0.94
SIX4-202ENST00000554079 CALHM3Q86XJ0 350 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 KLHL36Q8N4N3 616 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 B3GNT7Q8NFL0 401 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 OR2T11Q8NH01 316 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 GLYATL2Q8WU03 294 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 NUDT8Q8WV74 236 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 CHTF18Q8WVB6 975 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 SCRN2Q96FV2 425 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 PRMT6Q96LA8 375 aaPredicted RBP9.18□□□□□ -0.94
SIX4-202ENST00000554079 KCNC2Q96PR1 638 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 GMLQ99445 158 aa9.18□□□□□ -0.94
SIX4-202ENST00000554079 CMSS1Q9BQ75 279 aaKnown RBP9.18□□□□□ -0.94
SIX4-202ENST00000554079 CCM2Q9BSQ5 444 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms