RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 GALEQ14376 348 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 ZNF77Q15935 545 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 USP39Q53GS9 565 aaKnown RBP8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 ARSIQ5FYB1 569 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 ARMCX4Q5H9R4 360 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 PRSS48Q7RTY5 328 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 ANKRD53Q8N9V6 530 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 TTLQ8NG68 377 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 SLC13A3Q8WWT9 602 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 ASB11Q8WXH4 323 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 ZNF583Q96ND8 569 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 LRRC3BQ96PB8 259 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 SLC12A9Q9BXP2 914 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 HDHD5Q9BXW7 423 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 SLC32A1Q9H598 525 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 ZNF556Q9HAH1 456 aa8.69□□□□□ -1.02
AL049839.2-201ENST00000553947 OR2AG2A6NM03 316 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 NPPAP01160 153 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 MT-ND2P03891 347 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 LCKP06239 509 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 BCKDHAP12694 445 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 POU3F3P20264 500 aaPredicted RBP8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 ITPKAP23677 461 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 IRS1P35568 1242 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 SOX9P48436 509 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 PTCHD3Q3KNS1 767 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 SHEQ5VZ18 495 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 ANKRD34AQ69YU3 496 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 CES5AQ6NT32 575 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 DGLUCYQ7Z3D6 616 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 FAM86B1Q8N7N1 296 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 PAPD5Q8NDF8 572 aaKnown RBP8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 VANGL1Q8TAA9 524 aaPredicted RBP8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 ZFAND1Q8TCF1 268 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 ING5Q8WYH8 240 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 TOE1Q96GM8 510 aaKnown RBP8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 TMEM80Q96HE8 168 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 RNF170Q96K19 258 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 DPY30Q9C005 99 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 AMBRA1Q9C0C7 1298 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 ATG10Q9H0Y0 220 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 CARS2Q9HA77 564 aaKnown RBP8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 LIN7BQ9HAP6 207 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 IL23AQ9NPF7 189 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 EVA1BQ9NVM1 165 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 SLC22A14Q9Y267 594 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 PEX16Q9Y5Y5 336 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 IRAK3Q9Y616 596 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 KIAA0100Q14667 2235 aaKnown RBP8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 KCNE1BA0A087WTH5 132 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 CXorf51AA0A1B0GTR3 108 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 A0A1W2PRG6 482 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 CIB4A0PJX0 185 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 GRXCR2A6NFK2 248 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 WASH3PC4AMC7 463 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 WDR47O94967 919 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 CYP4B1P13584 511 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 TIMP2P16035 220 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 TACR1P25103 407 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 SLC6A12P48065 614 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 PRKCDQ05655 676 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 MESP2Q0VG99 397 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 LAPTM5Q13571 262 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 FAM98BQ52LJ0 330 aaKnown RBP8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 C10orf111Q8N326 155 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 LILRA3Q8N6C8 439 aaPredicted RBP8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 YIPF7Q8N8F6 280 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 POF1BQ8WVV4 589 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 AKAP1Q92667 903 aaKnown RBP eCLIP8.68□□□□□ -1.022e-18■■■■□ 24.2
AL049839.2-201ENST00000553947 TESCQ96BS2 214 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 GIMAP5Q96F15 307 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 KCNS3Q9BQ31 491 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 RIOK2Q9BVS4 552 aaKnown RBP8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 MUC13Q9H3R2 512 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 C3orf18Q9UK00 162 aa8.68□□□□□ -1.02
AL049839.2-201ENST00000553947 CARNS1A5YM72 827 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 GFYI3L273 518 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 RGS10O43665 173 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 FAM20BO75063 409 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 CST1P01037 141 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 CSF2P04141 144 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 PFKLP17858 780 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 ARHGDIAP52565 204 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 CDK5R2Q13319 367 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 SIM2Q14190 667 aaPredicted RBP8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 NDUFAF5Q5TEU4 345 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 RNF165Q6ZSG1 346 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 GALNT5Q7Z7M9 940 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 PLCZ1Q86YW0 608 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 RIMKLAQ8IXN7 391 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 OR10A6Q8NH74 314 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 ITFG1Q8TB96 612 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 SELENOMQ8WWX9 145 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 SIPA1Q96FS4 1042 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 FAM83DQ9H4H8 585 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 CLMPQ9H6B4 373 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 C1orf109Q9NX04 203 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 KLHL42Q9P2K6 505 aa8.67□□□□□ -1.02
AL049839.2-201ENST00000553947 INVSQ9Y283 1065 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms