RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ALS2CR12Q96Q35 445 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 ZNF559Q9BR84 538 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 UCK2Q9BZX2 261 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 TRIM45Q9H8W5 580 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-219ENST00000553488 FAM53CQ9NYF3 392 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 LRFN1Q9P244 771 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 C19orf25Q9UFG5 118 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-219ENST00000553488 TAC3Q9UHF0 121 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 PCYOX1Q9UHG3 505 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.82□□□□□ -1.32
ATXN3-219ENST00000553488 PCDHA3Q9Y5H8 950 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 MRFAP1Q9Y605 127 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 MXRA5Q9NR99 2828 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 FREM3P0C091 2139 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 NCKAP5O14513 1909 aa6.82□□□□□ -1.32
ATXN3-219ENST00000553488 ARID1AO14497 2285 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 A0A1B0GTH9 108 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 GOLGA6L22H0YM25 854 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 SUN1O94901 812 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 STATHP02808 62 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 TPOP07202 933 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 PKMP14618 531 aaKnown RBP6.81□□□□□ -1.32
ATXN3-219ENST00000553488 ATP5DP30049 168 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 XCR1P46094 333 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 AVPR1BP47901 424 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 AGTR2P50052 363 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 NR0B1P51843 470 aaKnown RBP6.81□□□□□ -1.32
ATXN3-219ENST00000553488 SLC26A5P58743 744 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 PRDX1Q06830 199 aaKnown RBP6.81□□□□□ -1.32
ATXN3-219ENST00000553488 KLF1Q13351 362 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-219ENST00000553488 PTK6Q13882 451 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 USP10Q14694 798 aaKnown RBP6.81□□□□□ -1.32
ATXN3-219ENST00000553488 FASTKD1Q53R41 847 aaKnown RBP6.81□□□□□ -1.32
ATXN3-219ENST00000553488 SFT2D3Q587I9 215 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 CMPK2Q5EBM0 449 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 AARS2Q5JTZ9 985 aaKnown RBP6.81□□□□□ -1.32
ATXN3-219ENST00000553488 TTC23LQ6PF05 361 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 CEP128Q6ZU80 1094 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 OTOAQ7RTW8 1153 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 LINC00523Q86TU6 105 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 PDSS2Q86YH6 399 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 PLD3Q8IV08 490 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 CCDC71Q8IV32 467 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-219ENST00000553488 LRRC56Q8IYG6 542 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-219ENST00000553488 KIF2BQ8N4N8 673 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 SLC5A8Q8N695 610 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 CHDHQ8NE62 594 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-219ENST00000553488 OR9A1PQ8NGU1 263 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 OR6P1Q8NGX9 317 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 SLC35B2Q8TB61 432 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 ELP5Q8TE02 316 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 SKA2Q8WVK7 121 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-219ENST00000553488 SMPDL3AQ92484 453 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 PEX13Q92968 403 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 TSLPQ969D9 159 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 RERGQ96A58 199 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-219ENST00000553488 SEC16BQ96JE7 1060 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 BIRC8Q96P09 236 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 PANX3Q96QZ0 392 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 TTC1Q99614 292 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 PRDM14Q9GZV8 571 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 LIME1Q9H400 295 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 LANCL2Q9NS86 450 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 CATSPERZQ9NTU4 200 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 CCM2LQ9NUG4 571 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-219ENST00000553488 ZNHIT6Q9NWK9 470 aaKnown RBP6.81□□□□□ -1.32
ATXN3-219ENST00000553488 HCN3Q9P1Z3 774 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 ST6GALNAC2Q9UJ37 374 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 L3MBTL1Q9Y468 752 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 TCAF1Q9Y4C2 921 aa6.81□□□□□ -1.32
ATXN3-219ENST00000553488 SYCE3A1L190 88 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 ERI2A8K979 691 aaKnown RBP6.8□□□□□ -1.32
ATXN3-219ENST00000553488 E7ENX8 843 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 TXNDC9O14530 226 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 TFECO14948 347 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-219ENST00000553488 SHOXO15266 292 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 PSMD3O43242 534 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 KLK8O60259 260 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 PSIP1O75475 530 aaKnown RBP6.8□□□□□ -1.32
ATXN3-219ENST00000553488 TJP3O95049 919 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 CCNDBP1O95273 360 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 SLC16A8O95907 504 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 IL1RNP18510 177 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 TFEBP19484 476 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 ADRA1DP25100 572 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 TRHRP34981 398 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-219ENST00000553488 RPA3P35244 121 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-219ENST00000553488 PTGS2P35354 604 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 RFC3P40938 356 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 BCL6P41182 706 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 TTPAP49638 278 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 MEOX1P50221 254 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 PNLIPRP1P54315 467 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 DLX5P56178 289 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 NUP107P57740 925 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 PPP2R2AP63151 447 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 PRAMEP78395 509 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 OC90Q02509 493 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-219ENST00000553488 TAP2Q03519 686 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 ARHGAP19Q14CB8 494 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms