RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 GCAP28676 217 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 HNRNPH1P31943 449 aaKnown RBP14.44□□□□□ -0.1
SHMT2-204ENST00000553324 PIK3CBP42338 1070 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 PLA2G16P53816 162 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 MTTPP55157 894 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 OLR1P78380 273 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 PHEXP78562 749 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 MFAP5Q13361 173 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 SLC6A19Q695T7 634 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 PLAG1Q6DJT9 500 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 ABHD17CQ6PCB6 329 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 VN1R5Q7Z5H4 357 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 EFCAB3Q8N7B9 438 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 LRRN4CLQ8ND94 238 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 OR7G3Q8NG95 312 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 M1APQ8TC57 530 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 PPP4R1Q8TF05 950 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 ZNF473Q8WTR7 871 aaKnown RBP14.44□□□□□ -0.1
SHMT2-204ENST00000553324 ATP6V1E2Q96A05 226 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 PHF21BQ96EK2 531 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 CMTM7Q96FZ5 175 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 PTCHD1Q96NR3 888 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 TBCDQ9BTW9 1192 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 MFRPQ9BY79 579 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 TRIM4Q9C037 500 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 IPPKQ9H8X2 491 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 COPS7BQ9H9Q2 264 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-204ENST00000553324 PRDM9Q9NQV7 894 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 ZNF358Q9NW07 568 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 PSD3Q9NYI0 1048 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 XPR1Q9UBH6 696 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 MRPS33Q9Y291 106 aaKnown RBP14.44□□□□□ -0.1
SHMT2-204ENST00000553324 MMACHCQ9Y4U1 282 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 DYTNA2CJ06 578 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 H0YIV9 168 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 E2F3O00716 465 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 ZNF500O60304 480 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-204ENST00000553324 B4GALT2O60909 372 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 DNAJB6O75190 326 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 SORBS2O94875 1100 aaKnown RBP14.43□□□□□ -0.1
SHMT2-204ENST00000553324 CLDN9O95484 217 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 B3GALT4O96024 378 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 UQCRHP07919 91 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 MYBL2P10244 700 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 PCNAP12004 261 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 TAC1P20366 129 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 PTX3P26022 381 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-204ENST00000553324 TSFMP43897 325 aaKnown RBP14.43□□□□□ -0.1
SHMT2-204ENST00000553324 ARFIP1P53367 373 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 MLLT10P55197 1068 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 OR4D2P58180 307 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 FOXK1P85037 733 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 C10orf62Q5T681 223 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-204ENST00000553324 Q6ZS92 163 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 GOLGA7Q7Z5G4 137 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 ATCAYQ86WG3 371 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 MYLK4Q86YV6 388 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-204ENST00000553324 IQCKQ8N0W5 287 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 CA13Q8N1Q1 262 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 PTGR2Q8N8N7 351 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-204ENST00000553324 DNAJB14Q8TBM8 379 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 CPT1CQ8TCG5 803 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 MAGEB10Q96LZ2 347 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-204ENST00000553324 F2RL3Q96RI0 385 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 WDR77Q9BQA1 342 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-204ENST00000553324 MESP1Q9BRJ9 268 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 MS4A8Q9BY19 250 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 AICDAQ9GZX7 198 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 ILKAPQ9H0C8 392 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-204ENST00000553324 DCDC2Q9UHG0 476 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 SPACA6W5XKT8 324 aa14.43□□□□□ -0.1
SHMT2-204ENST00000553324 PCSK5Q92824 1860 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 BLACEA4D250 179 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 OR2W5A6NFC9 320 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 SEC24DO94855 1032 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-204ENST00000553324 TBX6O95947 436 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-204ENST00000553324 GSTA1P08263 222 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 EEF1DP29692 281 aaKnown RBP14.42□□□□□ -0.1
SHMT2-204ENST00000553324 CCNG1P51959 295 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 EFNA3P52797 238 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 HSD17B7P56937 341 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 RAB38P57729 211 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 RUNX2Q13950 521 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 TLR1Q15399 786 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 AP5B1Q2VPB7 878 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 BTBD16Q32M84 506 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 PLEKHN1Q494U1 663 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-204ENST00000553324 SFT2D3Q587I9 215 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 DEPDC1Q5TB30 811 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 LANCL3Q6ZV70 420 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 ZNF595Q8IYB9 648 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 L3MBTL4Q8NA19 623 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 HUS1BQ8NHY5 278 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 BRIX1Q8TDN6 353 aaKnown RBP14.42□□□□□ -0.1
SHMT2-204ENST00000553324 UBLCP1Q8WVY7 318 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-204ENST00000553324 PSMF1Q92530 271 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 HAS2Q92819 552 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 QRFPRQ96P65 431 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 NTMT1Q9BV86 223 aa14.42□□□□□ -0.1
SHMT2-204ENST00000553324 RBCK1Q9BYM8 510 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms