RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 CAND1Q86VP6 1230 aaKnown RBP8.45□□□□□ -1.06
SYNE2-209ENST00000553308 TMEM139Q8IV31 216 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.45□□□□□ -1.06
SYNE2-209ENST00000553308 OR2M7Q8NG81 312 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 OR4K1Q8NGD4 311 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 NT5CQ8TCD5 201 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 EEF1AKMT1Q8WVE0 214 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 SREK1Q8WXA9 508 aaKnown RBP8.45□□□□□ -1.06
SYNE2-209ENST00000553308 NCLNQ969V3 563 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 PDLIM2Q96JY6 352 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 OR4K3Q96R72 315 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 SMC6Q96SB8 1091 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 NDNQ99608 321 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 TTYH2Q9BSA4 534 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 AARSD1Q9BTE6 412 aaKnown RBP8.45□□□□□ -1.06
SYNE2-209ENST00000553308 SARGQ9BW04 601 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 TTTY12Q9BZ98 90 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 TSGA10Q9BZW7 698 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 CLEC4MQ9H2X3 399 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-209ENST00000553308 ZDHHC11Q9H8X9 412 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 PARVBQ9HBI1 364 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 SLC24A3Q9HC58 644 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 SAMD15Q9P1V8 674 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 ZFATQ9P243 1243 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 Q9UFV3 132 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 ERVK-11Q9UQG0 969 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 RPH3AQ9Y2J0 694 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-209ENST00000553308 ZNF407Q9C0G0 2248 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 FIGNL2A6NMB9 653 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 A8MVJ9 347 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 TGFBR3LH3BV60 316 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 ACOT7O00154 380 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 PSMD12O00232 456 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-209ENST00000553308 EIF3FO00303 357 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-209ENST00000553308 PROM1O43490 865 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 OR2J2O76002 312 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 HAUS5O94927 633 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 OR6B1O95007 311 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 C8GP07360 202 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 ADH7P40394 386 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 SCTRP47872 440 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 ADAM8P78325 824 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 TIAL1Q01085 375 aaKnown RBP eCLIP8.44□□□□□ -1.06
SYNE2-209ENST00000553308 SP140Q13342 867 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 SKOR2Q2VWA4 1001 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-209ENST00000553308 XKR6Q5GH73 641 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 DRICH1Q6PGQ1 229 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-209ENST00000553308 ARSKQ6UWY0 536 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 IL20RBQ6UXL0 311 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 B3GNT6Q6ZMB0 384 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 KIAA0408Q6ZU52 694 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 STRA8Q7Z7C7 330 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 CA13Q8N1Q1 262 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 ANKRD53Q8N9V6 530 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 ARMC2Q8NEN0 867 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 MYRIPQ8NFW9 859 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 CREB3L4Q8TEY5 395 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 ASB15Q8WXK1 588 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 SLCO2A1Q92959 643 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 RMND5BQ96G75 393 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-209ENST00000553308 VMP1Q96GC9 406 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 SNF8Q96H20 258 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 TSNARE1Q96NA8 513 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 BAG1Q99933 345 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-209ENST00000553308 HAUS8Q9BT25 410 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 AICDAQ9GZX7 198 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 KLHL31Q9H511 634 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 PNO1Q9NRX1 252 aaKnown RBP8.44□□□□□ -1.06
SYNE2-209ENST00000553308 HPF1Q9NWY4 346 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 TRMT6Q9UJA5 497 aaKnown RBP8.44□□□□□ -1.06
SYNE2-209ENST00000553308 ZFP69BQ9UJL9 534 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 FBXO5Q9UKT4 447 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 CLDN16Q9Y5I7 305 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 COMMD10Q9Y6G5 202 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 ABCA2Q9BZC7 2435 aa8.44□□□□□ -1.06
SYNE2-209ENST00000553308 OR14I1A6ND48 311 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 BCKDKO14874 412 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 GLSO94925 669 aaPredicted RBP8.43□□□□□ -1.06
SYNE2-209ENST00000553308 IGHG3P01860 377 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 CELA3AP09093 270 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 SMIM10L1P0DMW3 83 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 DNASE1P24855 282 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 SOX3P41225 446 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 MAGEA5P43359 124 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 MAGEA6P43360 314 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 RGS4P49798 205 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 GPR143P51810 404 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 ZNF75DP51815 510 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 HNRNPFP52597 415 aaKnown RBP8.43□□□□□ -1.06
SYNE2-209ENST00000553308 REEP5Q00765 189 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 TERF2Q15554 542 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 TOR1AIP1Q5JTV8 583 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 RBM20Q5T481 1227 aaKnown RBP8.43□□□□□ -1.06
SYNE2-209ENST00000553308 ARMC3Q5W041 872 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 DUPD1Q68J44 220 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 LRRC8EQ6NSJ5 796 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 NIPAL1Q6NVV3 410 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 PAQR3Q6TCH7 311 aa8.43□□□□□ -1.06
SYNE2-209ENST00000553308 Q71RC1 249 aaPredicted RBP8.43□□□□□ -1.06
SYNE2-209ENST00000553308 TRILQ7L0X0 811 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms