RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ABHD17CQ6PCB6 329 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 QSOX2Q6ZRP7 698 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 PARP9Q8IXQ6 854 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 SAMD14Q8IZD0 417 aaPredicted RBP9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 C4orf33Q8N1A6 199 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 ZCCHC7Q8N3Z6 543 aaKnown RBP9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 TMEM151AQ8N4L1 468 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 CCNYL1Q8N7R7 359 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 KCT2Q8NC54 265 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 PLPP5Q8NEB5 264 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 OR9A4Q8NGU2 314 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 OR2W6PQ8NHA6 318 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 HUS1BQ8NHY5 278 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 TRPC4APQ8TEL6 797 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 SELENOMQ8WWX9 145 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 ESAMQ96AP7 390 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 MS4A6EQ96DS6 147 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 SMIM10Q96HG1 83 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 PELOQ9BRX2 385 aaKnown RBP9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 TUBB6Q9BUF5 446 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 MS4A8Q9BY19 250 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 C5AR2Q9P296 337 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 MKL2Q9ULH7 1088 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 ZNF490Q9ULM2 529 aaPredicted RBP9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 SH2B3Q9UQQ2 575 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 PCDHGA9Q9Y5G4 932 aaKnown RBP9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 MAU2Q9Y6X3 613 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 SPTA1P02549 2419 aa9.72□□□□□ -0.85
TRAFD1-208ENST00000552890 A0A1W2PQ72 361 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 SERTM1A2A2V5 107 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 MAGEB17A8MXT2 336 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 G3V2L1 256 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 NKX2-8O15522 239 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 P2RX6O15547 441 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 HPP00738 406 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 C8orf89P0DMQ9 161 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 PRKAR1AP10644 381 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 UROSP10746 265 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 COX7A2P14406 83 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 IL1RNP18510 177 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 HIST1H1TP22492 207 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 OTX2P32243 289 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 NAGLUP54802 743 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 SOX8P57073 446 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 TRA2BP62995 288 aaKnown RBP9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 CYP4F2P78329 520 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 BTN3A2P78410 334 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 KLC1Q07866 573 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 ACTN3Q08043 901 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 CASP8Q14790 479 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 TERF2Q15554 542 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 EXT1Q16394 746 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 DEFB109BQ30KR1 87 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 C18orf21Q32NC0 220 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 MINDY4Q4G0A6 757 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 SPIN4Q56A73 249 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 OR4C11Q6IEV9 310 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 C19orf48Q6RUI8 117 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 CYP20A1Q6UW02 462 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 RNF165Q6ZSG1 346 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 FRMD7Q6ZUT3 714 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 NDUFAF7Q7L592 441 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 MRGPREQ86SM8 312 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 NUDT13Q86X67 352 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 NUDCD3Q8IVD9 361 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 CYP4X1Q8N118 509 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 AMER3Q8N944 861 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 FAM76AQ8TAV0 307 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 ZCCHC10Q8TBK6 192 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 RAB3IL1Q8TBN0 382 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 TCP10LQ8TDR4 215 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 TANKQ92844 425 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 ZIM3Q96PE6 472 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 SPSB2Q99619 263 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 ING2Q9H160 280 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 SEMA4BQ9NPR2 832 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 RRAGDQ9NQL2 400 aaPredicted RBP9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 DMRT3Q9NQL9 472 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 VPS29Q9UBQ0 182 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 KCNMB2Q9Y691 235 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 WDFY3Q8IZQ1 3526 aa9.71□□□□□ -0.86
TRAFD1-208ENST00000552890 NSG1A0A0A6YYJ2 146 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 SGK494L7N484 410 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 OR7A17O14581 309 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 ATXN7O15265 892 aaPredicted RBP9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 CHST10O43529 356 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 ALOX12BO75342 701 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 RDH16O75452 317 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 MYO1DO94832 1006 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 EPORP19235 508 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 F8A1P23610 371 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 PLA2G16P53816 162 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 RAB38P57729 211 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 TAS2R50P59544 299 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 RAB8AP61006 207 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 TRAF3Q13114 568 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 DDX39BQ13838 428 aaKnown RBP9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 NSDHLQ15738 373 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 TBR1Q16650 682 aa9.7□□□□□ -0.86
TRAFD1-208ENST00000552890 IMPG1Q17R60 797 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms