RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 LCMT2O60294 686 aaKnown RBP11.12□□□□□ -0.63
CKAP4-202ENST00000552828 RDH16O75452 317 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 FAM155BO75949 473 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 TSPAN12O95859 305 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 HIST1H2AGP0C0S8 130 aaPredicted RBP11.12□□□□□ -0.63
CKAP4-202ENST00000552828 STMN1P16949 149 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 ZNF37AP17032 561 aaPredicted RBP11.12□□□□□ -0.63
CKAP4-202ENST00000552828 HIST1H2ADP20671 130 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 PGGT1BP53609 377 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 TBPL1P62380 186 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 SP140Q13342 867 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 ABRAXAS2Q15018 415 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 EFTUD2Q15029 972 aaKnown RBP eCLIP11.12□□□□□ -0.63
CKAP4-202ENST00000552828 SLC25A25Q6KCM7 469 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 CAPN13Q6MZZ7 669 aaPredicted RBP11.12□□□□□ -0.63
CKAP4-202ENST00000552828 PAPD4Q6PIY7 484 aaKnown RBP11.12□□□□□ -0.63
CKAP4-202ENST00000552828 ASPGQ86U10 573 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 DOLPP1Q86YN1 238 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 CEP97Q8IW35 865 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 ELP5Q8TE02 316 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 SLC13A3Q8WWT9 602 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 MRRFQ96E11 262 aaKnown RBP11.12□□□□□ -0.63
CKAP4-202ENST00000552828 HIST1H2AHQ96KK5 128 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 LPAR4Q99677 370 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 GPR22Q99680 433 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 HIST1H2AJQ99878 128 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 H2AFJQ9BTM1 129 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 SGPP1Q9BX95 441 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 TRIM54Q9BYV2 358 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 ENKD1Q9H0I2 346 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 PARVBQ9HBI1 364 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 NPIPA1Q9UND3 350 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 SH2B3Q9UQQ2 575 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 NAALAD2Q9Y3Q0 740 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 IKBKGQ9Y6K9 419 aa11.12□□□□□ -0.63
CKAP4-202ENST00000552828 FEZF1A0PJY2 475 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 E9PLN8 166 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 NME2P1O60361 137 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 FAM153BP0C7A2 387 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 NPPBP16860 134 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 NME2P22392 152 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 CCND1P24385 295 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 TRHRP34981 398 aaPredicted RBP11.11□□□□□ -0.63
CKAP4-202ENST00000552828 SLC26A5P58743 744 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 TAS2R50P59544 299 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 KRTAP10-9P60411 292 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 RAB10P61026 200 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 ACTN3Q08043 901 aaPredicted RBP11.11□□□□□ -0.63
CKAP4-202ENST00000552828 PWP1Q13610 501 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 ZNF460Q14592 562 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 HERC3Q15034 1050 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 UAP1Q16222 522 aaPredicted RBP11.11□□□□□ -0.63
CKAP4-202ENST00000552828 FAM153CQ494X1 144 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 RNFT1Q5M7Z0 435 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 UBAP2Q5T6F2 1119 aaKnown RBP11.11□□□□□ -0.63
CKAP4-202ENST00000552828 ZNF468Q5VIY5 522 aaPredicted RBP11.11□□□□□ -0.63
CKAP4-202ENST00000552828 AGTRAPQ6RW13 159 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 SPNS3Q6ZMD2 512 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 GALNTL5Q7Z4T8 443 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.11□□□□□ -0.63
CKAP4-202ENST00000552828 C17orf64Q86WR6 236 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 RPS19BP1Q86WX3 136 aaKnown RBP11.11□□□□□ -0.63
CKAP4-202ENST00000552828 ZNF227Q86WZ6 799 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 ARMC10Q8N2F6 343 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 GHDCQ8N2G8 530 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 MFSD9Q8NBP5 474 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 FAM98AQ8NCA5 519 aaKnown RBP11.11□□□□□ -0.63
CKAP4-202ENST00000552828 ABHD11Q8NFV4 315 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 OR4K1Q8NGD4 311 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 AGAP11Q8TF27 550 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.11□□□□□ -0.63
CKAP4-202ENST00000552828 TSLPQ969D9 159 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 DMRTA2Q96SC8 542 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 VKORC1Q9BQB6 163 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 TSPAN10Q9H1Z9 355 aaPredicted RBP11.11□□□□□ -0.63
CKAP4-202ENST00000552828 CAB39LQ9H9S4 337 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 IGSF5Q9NSI5 407 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 LRFN1Q9P244 771 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 ADAMTS6Q9UKP5 1117 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 PDE10AQ9Y233 779 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 ASB1Q9Y576 335 aa11.11□□□□□ -0.63
CKAP4-202ENST00000552828 PHGDHO43175 533 aaKnown RBP11.1□□□□□ -0.63
CKAP4-202ENST00000552828 GALR3O60755 368 aaPredicted RBP11.1□□□□□ -0.63
CKAP4-202ENST00000552828 SLC25A12O75746 678 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 CDC123O75794 336 aaPredicted RBP11.1□□□□□ -0.63
CKAP4-202ENST00000552828 FHP07954 510 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 INHBAP08476 426 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 ABHD2P08910 425 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 ENO2P09104 434 aaPredicted RBP11.1□□□□□ -0.63
CKAP4-202ENST00000552828 SLC35G6P0C7Q6 338 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 CRABP2P29373 138 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 GRK3P35626 688 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 MSH2P43246 934 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 OR4D2P58180 307 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 MEF2AQ02078 507 aaPredicted RBP11.1□□□□□ -0.63
CKAP4-202ENST00000552828 OC90Q02509 493 aaPredicted RBP11.1□□□□□ -0.63
CKAP4-202ENST00000552828 ZKSCAN8Q15776 578 aaPredicted RBP11.1□□□□□ -0.63
CKAP4-202ENST00000552828 MROH9Q5TGP6 573 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 LCTLQ6UWM7 567 aa11.1□□□□□ -0.63
CKAP4-202ENST00000552828 RAPH1Q70E73 1250 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms