RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 SLC12A2P55011 1212 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 MLF1P58340 268 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 TAS2R50P59544 299 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 STXBP1P61764 594 aaKnown RBP12.57□□□□□ -0.4
GCN1-206ENST00000549815 BTN3A2P78410 334 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 C2orf54Q08AI8 447 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 CALCOCO2Q13137 446 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 E2F2Q14209 437 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 OR4D1Q15615 310 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 FBXO48Q5FWF7 155 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 CDKL4Q5MAI5 379 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 ADNP2Q6IQ32 1131 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 SLC25A25Q6KCM7 469 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 GALNTL5Q7Z4T8 443 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 MAATS1Q7Z4T9 603 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 RPS19BP1Q86WX3 136 aaKnown RBP12.57□□□□□ -0.4
GCN1-206ENST00000549815 TICAM1Q8IUC6 712 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 TCAIMQ8N3R3 496 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 APCDD1LQ8NCL9 501 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 PDPRQ8NCN5 879 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 TMEM52Q8NDY8 209 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 TTLQ8NG68 377 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 ITLN2Q8WWU7 325 aaPredicted RBP12.57□□□□□ -0.4
GCN1-206ENST00000549815 CDKL2Q92772 493 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 ESAMQ96AP7 390 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 UBXN10Q96LJ8 280 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 FRMD6Q96NE9 622 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 CPNE1Q99829 537 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 NPLQ9BXD5 320 aaPredicted RBP12.57□□□□□ -0.4
GCN1-206ENST00000549815 PHACTR1Q9C0D0 580 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 PITHD1Q9GZP4 211 aaPredicted RBP12.57□□□□□ -0.4
GCN1-206ENST00000549815 RHBGQ9H310 441 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 EHD1Q9H4M9 534 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 KLHL1Q9NR64 748 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 LRFN1Q9P244 771 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 ZNF490Q9ULM2 529 aaPredicted RBP12.57□□□□□ -0.4
GCN1-206ENST00000549815 PPIEQ9UNP9 301 aaKnown RBP12.57□□□□□ -0.4
GCN1-206ENST00000549815 ZNF835Q9Y2P0 537 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 MMACHCQ9Y4U1 282 aa12.57□□□□□ -0.4
GCN1-206ENST00000549815 TRGV8A0A0C4DH27 118 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 A0A0G2JN53 185 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 PSMD12O00232 456 aaPredicted RBP12.56□□□□□ -0.4
GCN1-206ENST00000549815 H2AFYO75367 372 aaKnown RBP12.56□□□□□ -0.4
GCN1-206ENST00000549815 CLEC3AO75596 197 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 SP1P08047 785 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 GSTA2P09210 222 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 CD46P15529 392 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 CD22P20273 847 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 EEF1DP29692 281 aaKnown RBP12.56□□□□□ -0.4
GCN1-206ENST00000549815 TRHRP34981 398 aaPredicted RBP12.56□□□□□ -0.4
GCN1-206ENST00000549815 GMPRP36959 345 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 KCNC1P48547 511 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 HSPA7P48741 367 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 GPR143P51810 404 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 HNRNPFP52597 415 aaKnown RBP12.56□□□□□ -0.4
GCN1-206ENST00000549815 RAB38P57729 211 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 ATP6V0D1P61421 351 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.56□□□□□ -0.4
GCN1-206ENST00000549815 C3orf62Q6ZUJ4 267 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 GPSM1Q86YR5 675 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 SIAH3Q8IW03 269 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 CYP4X1Q8N118 509 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 SLC34A3Q8N130 599 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 TMEM178AQ8NBL3 297 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 THAP3Q8WTV1 239 aaPredicted RBP12.56□□□□□ -0.4
GCN1-206ENST00000549815 KIAA1191Q96A73 305 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 TSPAN17Q96FV3 270 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 CCDC120Q96HB5 630 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 GPR137Q96N19 417 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 CAPS2Q9BXY5 557 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 DNAJC11Q9NVH1 559 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 WWOXQ9NZC7 414 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 ZNF223Q9UK11 482 aaPredicted RBP12.56□□□□□ -0.4
GCN1-206ENST00000549815 PTBP2Q9UKA9 531 aaKnown RBP12.56□□□□□ -0.4
GCN1-206ENST00000549815 ENTPD4Q9Y227 616 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 ASB1Q9Y576 335 aa12.56□□□□□ -0.4
GCN1-206ENST00000549815 NCOA6Q14686 2063 aaPredicted RBP12.56□□□□□ -0.4
GCN1-206ENST00000549815 MYO9AB2RTY4 2548 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 A8MUA0 341 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 CCL21O00585 134 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 ERI3O43414 337 aaKnown RBP12.55□□□□□ -0.4
GCN1-206ENST00000549815 NME2P1O60361 137 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 STK16O75716 305 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 STMN1P16949 149 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 NME2P22392 152 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 RAB10P61026 200 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 OC90Q02509 493 aaPredicted RBP12.55□□□□□ -0.4
GCN1-206ENST00000549815 DLG1Q12959 904 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 DOC2AQ14183 400 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 TERF2Q15554 542 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 TRADDQ15628 312 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 SULT1C3Q6IMI6 304 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 ABHD17CQ6PCB6 329 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 ZDHHC24Q6UX98 284 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 Q6ZPB1 254 aaPredicted RBP12.55□□□□□ -0.4
GCN1-206ENST00000549815 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.55□□□□□ -0.4
GCN1-206ENST00000549815 CHERPQ8IWX8 916 aaKnown RBP12.55□□□□□ -0.4
GCN1-206ENST00000549815 KRT78Q8N1N4 520 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 B3GNT7Q8NFL0 401 aa12.55□□□□□ -0.4
GCN1-206ENST00000549815 OR2L5Q8NG80 312 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms