RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 HNRNPH1P31943 449 aaKnown RBP16.27■□□□□ 0.2
CHMP1A-205ENST00000548650 TRHRP34981 398 aaPredicted RBP16.27■□□□□ 0.2
CHMP1A-205ENST00000548650 STXBP1P61764 594 aaKnown RBP16.27■□□□□ 0.2
CHMP1A-205ENST00000548650 TGFBIQ15582 683 aa16.27■□□□□ 0.2
CHMP1A-205ENST00000548650 SP5Q6BEB4 398 aaPredicted RBP16.27■□□□□ 0.2
CHMP1A-205ENST00000548650 SLC25A25Q6KCM7 469 aa16.27■□□□□ 0.2
CHMP1A-205ENST00000548650 Q6ZPB1 254 aaPredicted RBP16.27■□□□□ 0.2
CHMP1A-205ENST00000548650 CAPN12Q6ZSI9 719 aa16.27■□□□□ 0.2
CHMP1A-205ENST00000548650 APCDD1LQ8NCL9 501 aa16.27■□□□□ 0.2
CHMP1A-205ENST00000548650 DERL2Q9GZP9 239 aa16.27■□□□□ 0.2
CHMP1A-205ENST00000548650 SNX24Q9Y343 169 aa16.27■□□□□ 0.2
CHMP1A-205ENST00000548650 MMACHCQ9Y4U1 282 aa16.27■□□□□ 0.2
CHMP1A-205ENST00000548650 CLDN16Q9Y5I7 305 aa16.27■□□□□ 0.2
CHMP1A-205ENST00000548650 A0A0G2JN53 185 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 NCF1BA6NI72 391 aaPredicted RBP16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 ENO4A6NNW6 628 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 NCF1CA8MVU1 366 aaPredicted RBP16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 NPIPA5E9PKD4 350 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 MLYCDO95822 493 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 TBX6O95947 436 aaPredicted RBP16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 C1GALT1C1LP0DN25 315 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 NCF1P14598 390 aaPredicted RBP16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 ZNF24P17028 368 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 CASP6P55212 293 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 BTN3A2P78410 334 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 TERF2Q15554 542 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 KRTCAP3Q53RY4 240 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 RNFT1Q5M7Z0 435 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 ADNP2Q6IQ32 1131 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 TMIGD1Q6UXZ0 262 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 VN1R5Q7Z5H4 357 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 CHERPQ8IWX8 916 aaKnown RBP16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 FAM98AQ8NCA5 519 aaKnown RBP16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 TTLQ8NG68 377 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 MS4A6EQ96DS6 147 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 PDLIM2Q96JY6 352 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 KRT12Q99456 494 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 CAB39LQ9H9S4 337 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 NPIPA1Q9UND3 350 aa16.26■□□□□ 0.19
CHMP1A-205ENST00000548650 A8MUA0 341 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 CXorf49A8MYA2 514 aaPredicted RBP16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 TGFBR3LH3BV60 316 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 ERI3O43414 337 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 PRAMEF4O60810 478 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 GSTM2P28161 218 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 CYB561P49447 251 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 HLCSP50747 726 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 HNRNPFP52597 415 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 MRPS25P82663 173 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 POU4F1Q01851 419 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 RUNX2Q13950 521 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 MAPKAPK3Q16644 382 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 ADPRMQ3LIE5 342 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 PRAMEF9Q5VWM5 478 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 MCEMP1Q8IX19 187 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 SRRM1Q8IYB3 904 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 SPATA6LQ8N4H0 392 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 CPSF7Q8N684 471 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 TMEM52Q8NDY8 209 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 ARMC2Q8NEN0 867 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 B3GNT7Q8NFL0 401 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 SEC16BQ96JE7 1060 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 QRFPRQ96P65 431 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 GPRC5BQ9NZH0 403 aa16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 ZNF223Q9UK11 482 aaPredicted RBP16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 PPIEQ9UNP9 301 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 MTO1Q9Y2Z2 717 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-205ENST00000548650 TRBV11-1A0A0K0K1C0 115 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 LRIT2A6NDA9 550 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 TAPBPO15533 448 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 PHGDHO43175 533 aaKnown RBP16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 CLEC3AO75596 197 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 MYO1DO94832 1006 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 C1QAP02745 245 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 HTR1EP28566 365 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 PPP2R1BP30154 601 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 SSTR1P30872 391 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 PAFAH1B1P43034 410 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 SLC12A2P55011 1212 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 RAB38P57729 211 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 HSF1Q00613 529 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 ILF2Q12905 390 aaKnown RBP16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 ZKSCAN8Q15776 578 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 ZNF630Q2M218 657 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 FBXO48Q5FWF7 155 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 SPPL2CQ8IUH8 684 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 TCAIMQ8N3R3 496 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 CCT6BQ92526 530 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 FAR2Q96K12 515 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 GPR22Q99680 433 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 NPLQ9BXD5 320 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 DEFB126Q9BYW3 111 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 PITHD1Q9GZP4 211 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 EHD1Q9H4M9 534 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 NT5DC2Q9H857 520 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 DNAJC11Q9NVH1 559 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 WWOXQ9NZC7 414 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 PYCARDQ9ULZ3 195 aa16.24■□□□□ 0.19
CHMP1A-205ENST00000548650 TCRBV9S1A1TA0A576 114 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms