RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 TUBBP07437 444 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 NR1D1P20393 614 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 CERS1P27544 350 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 CCT5P48643 541 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 NEK2P51955 445 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 PRKAA2P54646 552 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 RPS13P62277 151 aaKnown RBP8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 HERVK_113P63132 956 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 EEF1A2Q05639 463 aaKnown RBP8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 SLC18A2Q05940 514 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 ZNF844Q08AG5 666 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 TRAF3Q13114 568 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 RAPSNQ13702 412 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 RUNX2Q13950 521 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 ZRSR2Q15696 482 aaKnown RBP8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 DCAF10Q5QP82 559 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 ZNF678Q5SXM1 525 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 LIPJQ5W064 366 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 METTL2BQ6P1Q9 378 aaKnown RBP8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 ABHD17CQ6PCB6 329 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 ZYG11AQ6WRX3 759 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 MED25Q71SY5 747 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 UBE3DQ7Z6J8 389 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 MILR1Q7Z6M3 343 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 TRABD2AQ86V40 505 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 SRRM1Q8IYB3 904 aaKnown RBP8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 CNPY4Q8N129 248 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 CA13Q8N1Q1 262 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 AMER2Q8N7J2 671 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 TMEM102Q8N9M5 508 aaPredicted RBP8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 L3MBTL4Q8NA19 623 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 CCDC63Q8NA47 563 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 LSM14AQ8ND56 463 aaKnown RBP8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 OR4F6Q8NGB9 312 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 HUS1BQ8NHY5 278 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 C9orf43Q8TAL5 461 aaPredicted RBP8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 TRPC4APQ8TEL6 797 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 MTFMTQ96DP5 389 aaKnown RBP8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 SEC16BQ96JE7 1060 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 FAR2Q96K12 515 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 FER1L6-AS2Q96M78 137 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 QRFPRQ96P65 431 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 IP6K3Q96PC2 410 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 TMEM237Q96Q45 408 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 MTERF1Q99551 399 aaKnown RBP8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 ERVK-6Q9BXR3 956 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 MS4A8Q9BY19 250 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 ROPN1BQ9BZX4 212 aaPredicted RBP8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 TGIF2Q9GZN2 237 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 VN1R1Q9GZP7 353 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 ADNPQ9H2P0 1102 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 OR51B5Q9H339 312 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 ROPN1Q9HAT0 212 aaPredicted RBP8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 RRAGDQ9NQL2 400 aaPredicted RBP8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 LGALS13Q9UHV8 139 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 GRID1Q9ULK0 1009 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 MED13Q9UHV7 2174 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 NBEAQ8NFP9 2946 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 CCDC88CQ9P219 2028 aa8.39□□□□□ -1.07
SMARCC2-205ENST00000548130 PCSK5Q92824 1860 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 IGHV3-20A0A0C4DH32 117 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 FAM227AF5H4B4 570 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 G3V2L1 256 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 H0YIV9 168 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 MKRN2OSH3BPM6 223 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 AGPSO00116 658 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 B3GALT2O43825 422 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 UGDHO60701 494 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 B4GALT2O60909 372 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 SPAG7O75391 227 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 PDGFAP04085 211 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 FHP07954 510 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 MYL2P10916 166 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 ACPPP15309 386 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 IMPDH1P20839 514 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 RRADP55042 308 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 MTTPP55157 894 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 SKP1P63208 163 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 CLCQ05315 142 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 NFATC3Q12968 1075 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 ADPRMQ3LIE5 342 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 KRT71Q3SY84 523 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 TUBB8Q3ZCM7 444 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 SGO1Q5FBB7 561 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 TTC19Q6DKK2 380 aaPredicted RBP8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 NIPAL1Q6NVV3 410 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 LETMD1Q6P1Q0 360 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 TRIM40Q6P9F5 258 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 ZNF793Q6ZN11 406 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 LANCL3Q6ZV70 420 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 SLC22A9Q8IVM8 553 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 CCNYL1Q8N7R7 359 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 CLEC1AQ8NC01 280 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 ARMC2Q8NEN0 867 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 FDCSPQ8NFU4 85 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 OR2L5Q8NG80 312 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 OR11G2Q8NGC1 345 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 WDR20Q8TBZ3 569 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 TSLPQ969D9 159 aa8.38□□□□□ -1.07
SMARCC2-205ENST00000548130 TBC1D20Q96BZ9 403 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms