RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 MAGEB17A8MXT2 336 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 STMND1H3BQB6 276 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 HAT1O14929 419 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 SCRG1O75711 98 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 DLGAP3O95886 979 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 LIPCP11150 499 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 PIK3CBP42338 1070 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 MNAT1P51948 309 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 ITGA1P56199 1179 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 RPL38P63173 70 aaKnown RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 PHEXP78562 749 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 RBBP5Q15291 538 aaKnown RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 AGKQ53H12 422 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 IL23RQ5VWK5 629 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 PAQR7Q86WK9 346 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 MCATQ8IVS2 390 aaKnown RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 SPACA3Q8IXA5 215 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 PARP9Q8IXQ6 854 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 POU5F2Q8N7G0 328 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 RP9Q8TA86 221 aaKnown RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 CRELD1Q96HD1 420 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 ZPBPQ9BS86 351 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 SPRY4Q9C004 299 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 BRINP2Q9C0B6 783 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 AKIRIN1Q9H9L7 192 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 SDR39U1Q9NRG7 319 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 NMRK1Q9NWW6 199 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 ASIC5Q9NY37 505 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 VPS29Q9UBQ0 182 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 ADGRE2Q9UHX3 823 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 PILRAQ9UKJ1 303 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 SNX7Q9UNH6 387 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 EIF3LQ9Y262 564 aaKnown RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 LOC105369274A0A096LPK9 316 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 LOC102723532A0A0G2JNH3 316 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 LOC100653049A0A140TA62 436 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 OR2A25A4D2G3 310 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 ANKRD65E5RJM6 399 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 RAD1O60671 282 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 KRT34O76011 436 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 EZRP15311 586 aaKnown RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 VSX2P58304 361 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 RPS13P62277 151 aaKnown RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 CYLC2Q14093 348 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 MAPRE2Q15555 327 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 PDCD4Q53EL6 469 aaKnown RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 ADNP2Q6IQ32 1131 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 PAOXQ6QHF9 649 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 C19orf48Q6RUI8 117 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 OR4N4Q8N0Y3 316 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 SLC38A9Q8NBW4 561 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 SLC7A6OSQ96CW6 309 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 METTL2AQ96IZ6 378 aaKnown RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 RHBGQ9H310 441 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 DMRT3Q9NQL9 472 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 ACSL6Q9UKU0 697 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 PLCL2Q9UPR0 1127 aa16.54■□□□□ 0.24
HDAC7-227ENST00000548080 POLR3HQ9Y535 204 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-227ENST00000548080 DSPP15924 2871 aaKnown RBP16.53■□□□□ 0.24
HDAC7-227ENST00000548080 PKD1L2Q7Z442 2459 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 RRP8O43159 456 aaKnown RBP16.53■□□□□ 0.24
HDAC7-227ENST00000548080 OR2B3O76000 313 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 CD1EP15812 388 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 MAPK1P28482 360 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 PTPN4P29074 926 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 SERPINB1P30740 379 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 CPA2P48052 419 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 KIAA0040Q15053 153 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 FAM199XQ6PEV8 388 aaPredicted RBP16.53■□□□□ 0.24
HDAC7-227ENST00000548080 SNX32Q86XE0 403 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 DTX1Q86Y01 620 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 ZNF655Q8N720 491 aaPredicted RBP16.53■□□□□ 0.24
HDAC7-227ENST00000548080 NKD1Q969G9 470 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 ZUFSPQ96AP4 578 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 APIPQ96GX9 242 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 B3GNT4Q9C0J1 378 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 TMEM45AQ9NWC5 275 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 ZIM2Q9NZV7 527 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 SERTAD3Q9UJW9 196 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 PPT2Q9UMR5 302 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 TMED5Q9Y3A6 229 aa16.53■□□□□ 0.24
HDAC7-227ENST00000548080 TMEM184BQ9Y519 407 aaPredicted RBP16.53■□□□□ 0.24
HDAC7-227ENST00000548080 FER1L5A0AVI2 2057 aa16.52■□□□□ 0.24
HDAC7-227ENST00000548080 TRBC2A0A5B9 178 aa16.52■□□□□ 0.23
HDAC7-227ENST00000548080 FEZF1A0PJY2 475 aa16.52■□□□□ 0.23
HDAC7-227ENST00000548080 ANKDD1BA6NHY2 528 aa16.52■□□□□ 0.23
HDAC7-227ENST00000548080 B2RBV5 119 aa16.52■□□□□ 0.23
HDAC7-227ENST00000548080 H3BMH7 237 aa16.52■□□□□ 0.23
HDAC7-227ENST00000548080 ZNF749O43361 778 aa16.52■□□□□ 0.23
HDAC7-227ENST00000548080 OR1F1O43749 312 aa16.52■□□□□ 0.23
HDAC7-227ENST00000548080 FKBP9O95302 570 aa16.52■□□□□ 0.23
HDAC7-227ENST00000548080 ETHE1O95571 254 aa16.52■□□□□ 0.23
HDAC7-227ENST00000548080 EIF2S1P05198 315 aaKnown RBP16.52■□□□□ 0.23
HDAC7-227ENST00000548080 G6PDP11413 515 aa16.52■□□□□ 0.23
HDAC7-227ENST00000548080 CD82P27701 267 aa16.52■□□□□ 0.23
HDAC7-227ENST00000548080 GRK3P35626 688 aa16.52■□□□□ 0.23
HDAC7-227ENST00000548080 NME5P56597 212 aa16.52■□□□□ 0.23
HDAC7-227ENST00000548080 ACTN3Q08043 901 aaPredicted RBP16.52■□□□□ 0.23
HDAC7-227ENST00000548080 C1orf189Q5VU69 101 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms