RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 B4E171 279 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 PSMD12O00232 456 aaPredicted RBP15.04■□□□□ -0
TRAFD1-203ENST00000547063 RRP9O43818 475 aaKnown RBP15.04■□□□□ -0
TRAFD1-203ENST00000547063 B3GALT2O43825 422 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 G6PDP11413 515 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 DDX5P17844 614 aaKnown RBP15.04■□□□□ -0
TRAFD1-203ENST00000547063 SDC1P18827 310 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 PRPS1L1P21108 318 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 ATP5A1P25705 553 aaKnown RBP15.04■□□□□ -0
TRAFD1-203ENST00000547063 TPP2P29144 1249 aaPredicted RBP15.04■□□□□ -0
TRAFD1-203ENST00000547063 RPL3P39023 403 aaKnown RBP15.04■□□□□ -0
TRAFD1-203ENST00000547063 TSPAN7P41732 249 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 AVPR1BP47901 424 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 CLNS1AP54105 237 aaKnown RBP15.04■□□□□ -0
TRAFD1-203ENST00000547063 RAB8AP61006 207 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 RAE1P78406 368 aaKnown RBP15.04■□□□□ -0
TRAFD1-203ENST00000547063 C16orf72Q14CZ0 275 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 MAPRE2Q15555 327 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 DEFB134Q4QY38 66 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 DHRS13Q6UX07 377 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 PPP1R3BQ86XI6 285 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 ACOT4Q8N9L9 421 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 GLB1L3Q8NCI6 653 aaPredicted RBP15.04■□□□□ -0
TRAFD1-203ENST00000547063 OR1L3Q8NH93 324 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 NPLQ9BXD5 320 aaPredicted RBP15.04■□□□□ -0
TRAFD1-203ENST00000547063 ZNF717Q9BY31 904 aaPredicted RBP15.04■□□□□ -0
TRAFD1-203ENST00000547063 DPY30Q9C005 99 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 AICDAQ9GZX7 198 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 SPRTNQ9H040 489 aaPredicted RBP15.04■□□□□ -0
TRAFD1-203ENST00000547063 ZNF385DQ9H6B1 395 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 FBXO8Q9NRD0 319 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 CUTCQ9NTM9 273 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 MS4A12Q9NXJ0 267 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 CLCA2Q9UQC9 943 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 DLGAP4Q9Y2H0 992 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 SPACA6W5XKT8 324 aa15.04■□□□□ -0
TRAFD1-203ENST00000547063 GVINP1Q7Z2Y8 2422 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 A0A0A6YYD5 115 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 H3BMH7 237 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 RTCAO00442 366 aaKnown RBP15.03■□□□□ -0
TRAFD1-203ENST00000547063 EBAG9O00559 213 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 POLR1CO15160 346 aaPredicted RBP15.03■□□□□ -0
TRAFD1-203ENST00000547063 GALR3O60755 368 aaPredicted RBP15.03■□□□□ -0
TRAFD1-203ENST00000547063 CSO75390 466 aaKnown RBP15.03■□□□□ -0
TRAFD1-203ENST00000547063 SLC22A3O75751 556 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 NSA2O95478 260 aaKnown RBP15.03■□□□□ -0
TRAFD1-203ENST00000547063 FGF5P12034 268 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 JAK1P23458 1154 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 NOVA1P51513 510 aaKnown RBP15.03■□□□□ -0
TRAFD1-203ENST00000547063 CLDN8P56748 225 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 RAB15P59190 212 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 MC2RQ01718 297 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 DPY19L1Q2PZI1 675 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 HES3Q5TGS1 186 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 FAM91A1Q658Y4 838 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 TRPM8Q7Z2W7 1104 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 CLNKQ7Z7G1 428 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 SLCO6A1Q86UG4 719 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 TMEM132CQ8N3T6 1108 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 ARHGEF39Q8N4T4 335 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 ERP27Q96DN0 273 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 MARK4Q96L34 752 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 TEFMQ96QE5 360 aaKnown RBP15.03■□□□□ -0
TRAFD1-203ENST00000547063 PRPF18Q99633 342 aaKnown RBP15.03■□□□□ -0
TRAFD1-203ENST00000547063 FAIM2Q9BWQ8 316 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 EBPLQ9BY08 206 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 SLC7A5P2Q9GIP4 190 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 MYNNQ9NPC7 610 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 LHX9Q9NQ69 397 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 STARD5Q9NSY2 213 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 PHF11Q9UIL8 331 aa15.03■□□□□ -0
TRAFD1-203ENST00000547063 COL27A1Q8IZC6 1860 aaPredicted RBP15.02■□□□□ -0
TRAFD1-203ENST00000547063 CCDC187A0A096LP49 1063 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 SPAARA0A1B0GVQ0 90 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 DYTNA2CJ06 578 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 H0YIG0 161 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 EEDO75530 441 aaKnown RBP15.02■□□□□ -0
TRAFD1-203ENST00000547063 KLHL18O94889 574 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 FAM58BPP0C7Q3 252 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 GPX3P22352 226 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 HPCAL1P37235 193 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 C21orf58P58505 322 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 SLAMF1Q13291 335 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 HEPACAMQ14CZ8 416 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.02■□□□□ -0
TRAFD1-203ENST00000547063 PRMT9Q6P2P2 845 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 ZNF793Q6ZN11 406 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 RAB11FIP2Q7L804 512 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 R3HCC1LQ7Z5L2 792 aaKnown RBP15.02■□□□□ -0
TRAFD1-203ENST00000547063 TMPRSS12Q86WS5 348 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 TMEM126BQ8IUX1 230 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 ADAMTS18Q8TE60 1221 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 C16orf78Q8WTQ4 265 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 TSPEARQ8WU66 669 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 MTERF3Q96E29 417 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 C10orf90Q96M02 699 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 TSSK3Q96PN8 268 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 ZPBPQ9BS86 351 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 RTKNQ9BST9 563 aa15.02■□□□□ -0
TRAFD1-203ENST00000547063 TUBB6Q9BUF5 446 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms