RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 SNRPB2P08579 225 aaKnown RBP13.38□□□□□ -0.27
TROAP-203ENST00000546735 GNAZP19086 355 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 TNFRSF8P28908 595 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 PPP2R1BP30154 601 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 GMPRP36959 345 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 HNMTP50135 292 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 SLC12A2P55011 1212 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 MLF1P58340 268 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 ART3Q13508 389 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 TGFBIQ15582 683 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 PRAMEF9Q5VWM5 478 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 TMIGD1Q6UXZ0 262 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 SPPL2CQ8IUH8 684 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 SIAH3Q8IW03 269 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 MCEMP1Q8IX19 187 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 KLHDC8AQ8IYD2 350 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 ZNF808Q8N4W9 903 aaPredicted RBP13.38□□□□□ -0.27
TROAP-203ENST00000546735 CPSF7Q8N684 471 aaKnown RBP13.38□□□□□ -0.27
TROAP-203ENST00000546735 HORMAD2Q8N7B1 307 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 SREK1Q8WXA9 508 aaKnown RBP13.38□□□□□ -0.27
TROAP-203ENST00000546735 GAL3ST3Q96A11 431 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 MAGED4Q96JG8 741 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 PDLIM2Q96JY6 352 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 FAR2Q96K12 515 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 DEFB126Q9BYW3 111 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 CLK4Q9HAZ1 481 aaKnown RBP13.38□□□□□ -0.27
TROAP-203ENST00000546735 SAYSD1Q9NPB0 183 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 PNO1Q9NRX1 252 aaKnown RBP13.38□□□□□ -0.27
TROAP-203ENST00000546735 NSMCE4AQ9NXX6 385 aa13.38□□□□□ -0.27
TROAP-203ENST00000546735 MYOCOSA0A1B0GUC4 107 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 LRIT2A6NDA9 550 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 ERI3O43414 337 aaKnown RBP13.37□□□□□ -0.27
TROAP-203ENST00000546735 ASNA1O43681 348 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 NME2P1O60361 137 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 MYO1DO94832 1006 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 TBX6O95947 436 aaPredicted RBP13.37□□□□□ -0.27
TROAP-203ENST00000546735 CCDC166P0CW27 439 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 ESRRAP11474 423 aaPredicted RBP13.37□□□□□ -0.27
TROAP-203ENST00000546735 NME2P22392 152 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 HTR1EP28566 365 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 HSPA7P48741 367 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 CYB561P49447 251 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 PLA2G16P53816 162 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 CASP6P55212 293 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 STXBP1P61764 594 aaKnown RBP13.37□□□□□ -0.27
TROAP-203ENST00000546735 CDSNQ15517 529 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 OR4D1Q15615 310 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.37□□□□□ -0.27
TROAP-203ENST00000546735 KRTCAP3Q53RY4 240 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 VN1R5Q7Z5H4 357 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 FAM47BQ8NA70 645 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 FAM98AQ8NCA5 519 aaKnown RBP13.37□□□□□ -0.27
TROAP-203ENST00000546735 APCDD1LQ8NCL9 501 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 PYROXD1Q8WU10 500 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 MS4A6EQ96DS6 147 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 DERL2Q9GZP9 239 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 POPDC3Q9HBV1 291 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 PRTFDC1Q9NRG1 225 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 WWOXQ9NZC7 414 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 ZNF223Q9UK11 482 aaPredicted RBP13.37□□□□□ -0.27
TROAP-203ENST00000546735 FBXW2Q9UKT8 454 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 ZNF835Q9Y2P0 537 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 CLDN16Q9Y5I7 305 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 KLF2Q9Y5W3 355 aaPredicted RBP13.37□□□□□ -0.27
TROAP-203ENST00000546735 MYO7BQ6PIF6 2116 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 ITPR2Q14571 2701 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 CSMD1Q96PZ7 3565 aa13.37□□□□□ -0.27
TROAP-203ENST00000546735 ENO4A6NNW6 628 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 MLYCDO95822 493 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 CD1DP15813 335 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 ZNF24P17028 368 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 CERS1P27544 350 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 RFC3P40938 356 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 HLCSP50747 726 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 RAB38P57729 211 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 POU4F1Q01851 419 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 MTFR2Q6P444 385 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 RPTNQ6XPR3 784 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 BNC2Q6ZN30 1099 aaPredicted RBP13.36□□□□□ -0.27
TROAP-203ENST00000546735 C16orf47Q6ZP98 133 aaPredicted RBP13.36□□□□□ -0.27
TROAP-203ENST00000546735 CLNKQ7Z7G1 428 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 CHERPQ8IWX8 916 aaKnown RBP13.36□□□□□ -0.27
TROAP-203ENST00000546735 SCUBE1Q8IWY4 988 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 SNX31Q8N9S9 440 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 ARMC2Q8NEN0 867 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 B3GNT7Q8NFL0 401 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 ADAMTS18Q8TE60 1221 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 EXT2Q93063 718 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 QRFPRQ96P65 431 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 CSF3RQ99062 836 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 TRIM45Q9H8W5 580 aaPredicted RBP13.36□□□□□ -0.27
TROAP-203ENST00000546735 LIN28AQ9H9Z2 209 aaKnown RBP13.36□□□□□ -0.27
TROAP-203ENST00000546735 DNAJC11Q9NVH1 559 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 ZNF490Q9ULM2 529 aaPredicted RBP13.36□□□□□ -0.27
TROAP-203ENST00000546735 MMACHCQ9Y4U1 282 aa13.36□□□□□ -0.27
TROAP-203ENST00000546735 CELSR2Q9HCU4 2923 aa13.35□□□□□ -0.27
TROAP-203ENST00000546735 TCRBV9S1A1TA0A576 114 aa13.35□□□□□ -0.27
TROAP-203ENST00000546735 ANKDD1BA6NHY2 528 aa13.35□□□□□ -0.27
TROAP-203ENST00000546735 CLGNO14967 610 aa13.35□□□□□ -0.27
TROAP-203ENST00000546735 RAD51CO43502 376 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms