RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 A0A0G2JMM0 328 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 A0A1W2PPB8 328 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 A0A1W2PRS3 328 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 KIR3DP1A8MWS1 328 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 G3V3Y1 287 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 ACOT7O00154 380 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 NDUFS4O43181 175 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 CEP104O60308 925 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 IGHG3P01860 377 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 F7P08709 466 aaPredicted RBP11.84□□□□□ -0.51
SCAF11-208ENST00000546534 ZSCAN5DPP0CG00 497 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 CDH1P12830 882 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 OGNP20774 298 aaKnown RBP11.84□□□□□ -0.51
SCAF11-208ENST00000546534 UQCRC1P31930 480 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 GRK3P35626 688 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 CYLC1P35663 651 aaPredicted RBP11.84□□□□□ -0.51
SCAF11-208ENST00000546534 SSR4P51571 173 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 TTLL9Q3SXZ7 439 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 FLYWCH1Q4VC44 716 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 C16orf47Q6ZP98 133 aaPredicted RBP11.84□□□□□ -0.51
SCAF11-208ENST00000546534 RGS9BPQ6ZS82 235 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 UBE2R2Q712K3 238 aaPredicted RBP11.84□□□□□ -0.51
SCAF11-208ENST00000546534 PIWIL4Q7Z3Z4 852 aaKnown RBP11.84□□□□□ -0.51
SCAF11-208ENST00000546534 PEX26Q7Z412 305 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 SLC22A16Q86VW1 577 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 UBL4BQ8N7F7 174 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 B3GNT7Q8NFL0 401 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 LACRTQ9GZZ8 138 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 PCBD2Q9H0N5 130 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 ZFATQ9P243 1243 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 AMFRQ9UKV5 643 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 CBLCQ9ULV8 474 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 ZNF148Q9UQR1 794 aa11.84□□□□□ -0.51
SCAF11-208ENST00000546534 YARS2Q9Y2Z4 477 aaKnown RBP11.84□□□□□ -0.51
SCAF11-208ENST00000546534 A0A1B0GVC2 190 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 A8MVJ9 347 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 BTNL10A8MVZ5 291 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 SYT5O00445 386 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 OR1F1O43749 312 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 PRKNO60260 465 aaPredicted RBP11.83□□□□□ -0.52
SCAF11-208ENST00000546534 WDR1O75083 606 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 MYO1DO94832 1006 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 GLSO94925 669 aaPredicted RBP11.83□□□□□ -0.52
SCAF11-208ENST00000546534 SERPIND1P05546 499 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 HEXAP06865 529 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 CELA3AP09093 270 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 ZNF888P0CJ79 500 aaPredicted RBP11.83□□□□□ -0.52
SCAF11-208ENST00000546534 ENO3P13929 434 aaPredicted RBP11.83□□□□□ -0.52
SCAF11-208ENST00000546534 NPPBP16860 134 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 MGAT1P26572 445 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 RPL22P35268 128 aaKnown RBP11.83□□□□□ -0.52
SCAF11-208ENST00000546534 MAGEA5P43359 124 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 NAE1Q13564 534 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 PWP1Q13610 501 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 KEAP1Q14145 624 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 XKR6Q5GH73 641 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 C1orf185Q5T7R7 199 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 NDUFAF5Q5TEU4 345 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 CHSY3Q70JA7 882 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 TRILQ7L0X0 811 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 KRTAP1-3Q8IUG1 177 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 CILP2Q8IUL8 1156 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 TMEM251Q8N6I4 163 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 FAM222BQ8WU58 562 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 NUDT8Q8WV74 236 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 C1orf54Q8WWF1 131 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 ALKBH8Q96BT7 664 aaKnown RBP11.83□□□□□ -0.52
SCAF11-208ENST00000546534 CNPPD1Q9BV87 410 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 SARGQ9BW04 601 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 ATG10Q9H0Y0 220 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 RHBGQ9H310 441 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 LIN28AQ9H9Z2 209 aaKnown RBP11.83□□□□□ -0.52
SCAF11-208ENST00000546534 EIF2B3Q9NR50 452 aaKnown RBP11.83□□□□□ -0.52
SCAF11-208ENST00000546534 HPF1Q9NWY4 346 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 SYBUQ9NX95 663 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 PAK5Q9P286 719 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 KLHL42Q9P2K6 505 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 ACAD8Q9UKU7 415 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 DRG1Q9Y295 367 aaKnown RBP11.83□□□□□ -0.52
SCAF11-208ENST00000546534 DHRS7Q9Y394 339 aa11.83□□□□□ -0.52
SCAF11-208ENST00000546534 HRNRQ86YZ3 2850 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-208ENST00000546534 MIF4GDA9UHW6 222 aaKnown RBP11.82□□□□□ -0.52
SCAF11-208ENST00000546534 SIAH2O43255 324 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 OR2J2O76002 312 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 OR6B1O95007 311 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 LY6G6DO95868 133 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 FTCDO95954 541 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 RNH1P13489 461 aaKnown RBP11.82□□□□□ -0.52
SCAF11-208ENST00000546534 PEX19P40855 299 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 GPR143P51810 404 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 SKP1P63208 163 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 SNX1Q13596 522 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 DAZAP2Q15038 168 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-208ENST00000546534 RIPPLY2Q5TAB7 128 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 KIAA0930Q6ICG6 404 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-208ENST00000546534 NIPAL1Q6NVV3 410 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 NEPROQ6NW34 567 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 ZNF549Q6P9A3 640 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 AGTRAPQ6RW13 159 aa11.82□□□□□ -0.52
SCAF11-208ENST00000546534 LCTLQ6UWM7 567 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms