RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 UBE2E3Q969T4 207 aa8.78□□□□□ -1
YBX3-218ENST00000546298 KIAA1191Q96A73 305 aa8.78□□□□□ -1
YBX3-218ENST00000546298 PTCD3Q96EY7 689 aaKnown RBP8.78□□□□□ -1
YBX3-218ENST00000546298 DEFB126Q9BYW3 111 aa8.78□□□□□ -1
YBX3-218ENST00000546298 UNKQ9C0B0 810 aaKnown RBP8.78□□□□□ -1
YBX3-218ENST00000546298 ROGDIQ9GZN7 287 aa8.78□□□□□ -1
YBX3-218ENST00000546298 KLHL31Q9H511 634 aa8.78□□□□□ -1
YBX3-218ENST00000546298 CDCP1Q9H5V8 836 aa8.78□□□□□ -1
YBX3-218ENST00000546298 RUBCNLQ9H714 662 aa8.78□□□□□ -1
YBX3-218ENST00000546298 CAB39LQ9H9S4 337 aa8.78□□□□□ -1
YBX3-218ENST00000546298 NMRAL1Q9HBL8 299 aa8.78□□□□□ -1
YBX3-218ENST00000546298 GRHL1Q9NZI5 618 aa8.78□□□□□ -1
YBX3-218ENST00000546298 COPG2Q9UBF2 871 aa8.78□□□□□ -1
YBX3-218ENST00000546298 RNF112Q9ULX5 631 aa8.78□□□□□ -1
YBX3-218ENST00000546298 ICE1Q9Y2F5 2266 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 IGKV3D-11A0A0A0MRZ8 115 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 CCDC189A1A4V9 331 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 ASPDHA6ND91 283 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 LRIT2A6NDA9 550 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 SAGE2PA6NJ88 616 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 FAM227AF5H4B4 570 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 FANCGO15287 622 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 TAPBPO15533 448 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 CCNT2O60583 730 aaKnown RBP8.77□□□□□ -1.01
YBX3-218ENST00000546298 PIAS1O75925 651 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 SP1P08047 785 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 MAOAP21397 527 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 MST1P26927 711 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 MAGEA4P43358 317 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 HSPA7P48741 367 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 CYB561P49447 251 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 CLCN2P51788 898 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 PLA2G16P53816 162 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 MTTPP55157 894 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 RAB38P57729 211 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 MLF1P58340 268 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 IRF8Q02556 426 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 CKAP4Q07065 602 aaKnown RBP8.77□□□□□ -1.01
YBX3-218ENST00000546298 EFTUD2Q15029 972 aaKnown RBP eCLIP8.77□□□□□ -1.01
YBX3-218ENST00000546298 ZKSCAN8Q15776 578 aaPredicted RBP8.77□□□□□ -1.01
YBX3-218ENST00000546298 TBCCQ15814 346 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 C1QL3Q5VWW1 255 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 SPINK14Q6IE38 97 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 RAPH1Q70E73 1250 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 LRRC70Q7Z2Q7 622 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 CCDC91Q7Z6B0 441 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 TBC1D1Q86TI0 1168 aaPredicted RBP8.77□□□□□ -1.01
YBX3-218ENST00000546298 CCDC25Q86WR0 208 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 ZNF595Q8IYB9 648 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 PPM1NQ8N819 430 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 B3GNT7Q8NFL0 401 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 OR2L5Q8NG80 312 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 THAP3Q8WTV1 239 aaPredicted RBP8.77□□□□□ -1.01
YBX3-218ENST00000546298 TMEM125Q96AQ2 219 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 MS4A6EQ96DS6 147 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 WDR34Q96EX3 536 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 SCMH1Q96GD3 660 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 UBXN10Q96LJ8 280 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 SERINC2Q96SA4 455 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 TMEM79Q9BSE2 394 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 REXO4Q9GZR2 422 aaKnown RBP8.77□□□□□ -1.01
YBX3-218ENST00000546298 COPS7BQ9H9Q2 264 aaPredicted RBP8.77□□□□□ -1.01
YBX3-218ENST00000546298 NECTIN3Q9NQS3 549 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 KLHL1Q9NR64 748 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 PRTFDC1Q9NRG1 225 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 ANKRD10Q9NXR5 420 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 LRFN1Q9P244 771 aa8.77□□□□□ -1.01
YBX3-218ENST00000546298 PTBP2Q9UKA9 531 aaKnown RBP8.77□□□□□ -1.01
YBX3-218ENST00000546298 USP9YO00507 2555 aaPredicted RBP8.77□□□□□ -1.01
YBX3-218ENST00000546298 SPTAN1Q13813 2472 aaKnown RBP8.77□□□□□ -1.01
YBX3-218ENST00000546298 NAV2Q8IVL1 2488 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 CTAGE15A4D2H0 777 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 A8MUA0 341 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 CCL21O00585 134 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 ZG16O60844 167 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 SLC25A12O75746 678 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 LTA4HP09960 611 aaKnown RBP8.76□□□□□ -1.01
YBX3-218ENST00000546298 TFEBP19484 476 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 COL8A1P27658 744 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 SERPINB1P30740 379 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 TRHRP34981 398 aaPredicted RBP8.76□□□□□ -1.01
YBX3-218ENST00000546298 DCTP40126 519 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 CASP2P42575 452 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 HLCSP50747 726 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 GPX6P59796 221 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 SLC13A2Q13183 592 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 CHIT1Q13231 466 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 RUNX2Q13950 521 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 DOC2AQ14183 400 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 SLMAPQ14BN4 828 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 MAPKAPK3Q16644 382 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 ADPRMQ3LIE5 342 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 KBTBD12Q3ZCT8 623 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 ABHD17CQ6PCB6 329 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 RPTNQ6XPR3 784 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 SYT10Q6XYQ8 523 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 CEP128Q6ZU80 1094 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 CHSY3Q70JA7 882 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 GALNTL5Q7Z4T8 443 aa8.76□□□□□ -1.01
YBX3-218ENST00000546298 CTAGE6Q86UF2 777 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms