RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	GYS2	P54840	703 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	CHRNE	Q04844	493 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	KLC1	Q07866	573 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	C2orf54	Q08AI8	447 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	LAPTM5	Q13571	262 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	RBBP7	Q16576	425 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	NDUFA9	Q16795	377 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	PPP1R3A	Q16821	1122 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	TUBB8	Q3ZCM7	444 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	NADK2	Q4G0N4	442 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	DUPD1	Q68J44	220 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	CAPN13	Q6MZZ7	669 aa	Predicted RBP	7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	KIRREL2	Q6UWL6	708 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	IGFL3	Q6UXB1	125 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	VN1R4	Q7Z5H5	301 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	STRA8	Q7Z7C7	330 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	C17orf64	Q86WR6	236 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	TMEM151B	Q8IW70	566 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	AMER3	Q8N944	861 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	ABHD11	Q8NFV4	315 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	OR56A3	Q8NH54	315 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	STT3B	Q8TCJ2	826 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	ATL1	Q8WXF7	558 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	TM9SF4	Q92544	642 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	CDKL2	Q92772	493 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	KISS1R	Q969F8	398 aa	Predicted RBP	7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	PNPLA2	Q96AD5	504 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	MIEF2	Q96C03	454 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	FBXL8	Q96CD0	374 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	VPS39	Q96JC1	886 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	MAGEB10	Q96LZ2	347 aa	Predicted RBP	7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	PRAP1	Q96NZ9	151 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	ALPK1	Q96QP1	1244 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	CRB3	Q9BUF7	120 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	SARG	Q9BW04	601 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	TRIM54	Q9BYV2	358 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	RAB17	Q9H0T7	212 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	ATG10	Q9H0Y0	220 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	POPDC3	Q9HBV1	291 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	MKKS	Q9NPJ1	570 aa	Predicted RBP	7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	ABCF3	Q9NUQ8	709 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	GRHL1	Q9NZI5	618 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	SLAMF8	Q9P0V8	285 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	SH2B3	Q9UQQ2	575 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	UTP11	Q9Y3A2	253 aa	Known RBP	7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	LRRK2	Q5S007	2527 aa		7.28	□□□□□ -1.24
SNHG1-223	ENST00000545440	DIDO1	Q9BTC0	2240 aa	Known RBP	7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	FLNB	O75369	2602 aa	Known RBP	7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	FLNC	Q14315	2725 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	TCRBV9S1A1T	A0A576	114 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440		A6NL46	340 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440		H0YIG0	161 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	MAP2K7	O14733	419 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	FOXS1	O43638	330 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	NSA2	O95478	260 aa	Known RBP	7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	HP	P00738	406 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	GSTA2	P09210	222 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	SLC35G6	P0C7Q6	338 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	RAC2	P15153	192 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	ITGA3	P26006	1051 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	GRK3	P35626	688 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	MLLT10	P55197	1068 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	CSNK1G2	P78368	415 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	CDKL1	Q00532	357 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	TEK	Q02763	1124 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	CAV1	Q03135	178 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	CKAP4	Q07065	602 aa	Known RBP	7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	NAE1	Q13564	534 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	ZXDC	Q2QGD7	858 aa	Predicted RBP	7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	IRAK1BP1	Q5VVH5	260 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	JMJD6	Q6NYC1	403 aa	Predicted RBP	7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	TMEM207	Q6UWW9	146 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	SYT10	Q6XYQ8	523 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	SHISA6	Q6ZSJ9	500 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	CYS1	Q717R9	158 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	ADAMTSL2	Q86TH1	951 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	ASPG	Q86U10	573 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	MTDH	Q86UE4	582 aa	Known RBP	7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	PLD3	Q8IV08	490 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	C17orf53	Q8N3J3	647 aa	Predicted RBP	7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	NKAP	Q8N5F7	415 aa	Known RBP	7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	RBMXL3	Q8N7X1	1067 aa	Known RBP	7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	CAMKV	Q8NCB2	501 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	OR11G2	Q8NGC1	345 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	CPT1C	Q8TCG5	803 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	PYROXD1	Q8WU10	500 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	NINJ1	Q92982	152 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	MMAB	Q96EY8	250 aa	Predicted RBP	7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	CPNE1	Q99829	537 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	DPH5	Q9H2P9	285 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	ZNF552	Q9H707	407 aa	Predicted RBP	7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	SAYSD1	Q9NPB0	183 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	TRPC4	Q9UBN4	977 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	C3orf18	Q9UK00	162 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	ICE1	Q9Y2F5	2266 aa		7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	SPTAN1	Q13813	2472 aa	Known RBP	7.27	□□□□□ -1.25
SNHG1-223	ENST00000545440	POLE	Q07864	2286 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440		A0A0A6YYC8	382 aa	Predicted RBP	7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	CLEC18A	A5D8T8	446 aa		7.26	□□□□□ -1.25
SNHG1-223	ENST00000545440	NPEPPSL1	A6NEC2	478 aa		7.26	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms