RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SKP1P63208 163 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 BBS9Q3SYG4 887 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 XKR6Q5GH73 641 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 C1orf185Q5T7R7 199 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 NEPROQ6NW34 567 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 ZNF585AQ6P3V2 769 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 POMZP3Q6PJE2 187 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 AGTRAPQ6RW13 159 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 CES3Q6UWW8 571 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 SEM1Q6ZVN7 128 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 UBE2R2Q712K3 238 aaPredicted RBP13.67□□□□□ -0.22
RTN3-214ENST00000545432 SPNS2Q8IVW8 549 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 SCUBE1Q8IWY4 988 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 CYP4X1Q8N118 509 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 FAM109AQ8N4B1 249 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 TMEM251Q8N6I4 163 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 ACRBPQ8NEB7 543 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 CD200R1Q8TD46 325 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 UTP15Q8TED0 518 aaKnown RBP13.67□□□□□ -0.22
RTN3-214ENST00000545432 IL1RL2Q9HB29 575 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 DMRT3Q9NQL9 472 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 ABCF3Q9NUQ8 709 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 MMACHCQ9Y4U1 282 aa13.67□□□□□ -0.22
RTN3-214ENST00000545432 HRNRQ86YZ3 2850 aaPredicted RBP13.66□□□□□ -0.22
RTN3-214ENST00000545432 RTTNQ86VV8 2226 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 TRBC2A0A5B9 178 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 FAM171A2A8MVW0 826 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 CEP104O60308 925 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 GOSR1O95249 250 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 B3GALT4O96024 378 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 PTMAP06454 111 aaKnown RBP13.66□□□□□ -0.22
RTN3-214ENST00000545432 CDH1P12830 882 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 RNH1P13489 461 aaKnown RBP13.66□□□□□ -0.22
RTN3-214ENST00000545432 GABRA1P14867 456 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 OLR1P78380 273 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 CDK16Q00536 496 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 HYAL2Q12891 473 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 CLEC9AQ6UXN8 241 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 C4orf22Q6V702 233 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 Q71RC1 249 aaPredicted RBP13.66□□□□□ -0.22
RTN3-214ENST00000545432 PEX26Q7Z412 305 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 RELL2Q8NC24 303 aaPredicted RBP13.66□□□□□ -0.22
RTN3-214ENST00000545432 VMP1Q96GC9 406 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 SYBUQ9NX95 663 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 MYOTQ9UBF9 498 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 ZFP69BQ9UJL9 534 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 FOXD3Q9UJU5 478 aaPredicted RBP13.66□□□□□ -0.22
RTN3-214ENST00000545432 FBXW2Q9UKT8 454 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 PACSIN2Q9UNF0 486 aaPredicted RBP13.66□□□□□ -0.22
RTN3-214ENST00000545432 ZNF148Q9UQR1 794 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 PDE10AQ9Y233 779 aa13.66□□□□□ -0.22
RTN3-214ENST00000545432 A0A0G2JMM0 328 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 A0A1W2PPB8 328 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 A0A1W2PRS3 328 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 FAM166BA8MTA8 275 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 A8MVJ9 347 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 KIR3DP1A8MWS1 328 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 NDUFS4O43181 175 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 HCN1O60741 890 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 ZFAND5O76080 213 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 OR6B1O95007 311 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 ZSCAN5DPP0CG00 497 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 MGAT1P26572 445 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 AHRP35869 848 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 SCTRP47872 440 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 NAE1Q13564 534 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 CUL1Q13616 776 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 SNTB1Q13884 538 aaKnown RBP13.65□□□□□ -0.22
RTN3-214ENST00000545432 SHEQ5VZ18 495 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 GK5Q6ZS86 529 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 PIWIL4Q7Z3Z4 852 aaKnown RBP13.65□□□□□ -0.22
RTN3-214ENST00000545432 GOLM1Q8NBJ4 401 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 ARMC2Q8NEN0 867 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 RNASE6Q93091 150 aaKnown RBP13.65□□□□□ -0.22
RTN3-214ENST00000545432 SARAFQ96BY9 339 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 FAM173AQ9BQD7 235 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 HAUS8Q9BT25 410 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 AARSD1Q9BTE6 412 aaKnown RBP13.65□□□□□ -0.22
RTN3-214ENST00000545432 PARVBQ9HBI1 364 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 HPF1Q9NWY4 346 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 STAB1Q9NY15 2570 aa13.65□□□□□ -0.22
RTN3-214ENST00000545432 HSPB2A8KAH6 182 aa13.64□□□□□ -0.23
RTN3-214ENST00000545432 A8MUA0 341 aa13.64□□□□□ -0.23
RTN3-214ENST00000545432 SLC16A5O15375 505 aa13.64□□□□□ -0.23
RTN3-214ENST00000545432 OR2J2O76002 312 aa13.64□□□□□ -0.23
RTN3-214ENST00000545432 MYO1DO94832 1006 aa13.64□□□□□ -0.23
RTN3-214ENST00000545432 ZNF888P0CJ79 500 aaPredicted RBP13.64□□□□□ -0.23
RTN3-214ENST00000545432 EPXP11678 715 aa13.64□□□□□ -0.23
RTN3-214ENST00000545432 ENDOUP21128 410 aaKnown RBP13.64□□□□□ -0.23
RTN3-214ENST00000545432 ADSLP30566 484 aaPredicted RBP13.64□□□□□ -0.23
RTN3-214ENST00000545432 CEACAM8P31997 349 aaPredicted RBP13.64□□□□□ -0.23
RTN3-214ENST00000545432 MAGEA5P43359 124 aa13.64□□□□□ -0.23
RTN3-214ENST00000545432 CCR8P51685 355 aa13.64□□□□□ -0.23
RTN3-214ENST00000545432 NAP1L1P55209 391 aaKnown RBP13.64□□□□□ -0.23
RTN3-214ENST00000545432 TIAL1Q01085 375 aaKnown RBP eCLIP13.64□□□□□ -0.23
RTN3-214ENST00000545432 PLGLB1Q02325 96 aa13.64□□□□□ -0.23
RTN3-214ENST00000545432 HSPB2Q16082 182 aa13.64□□□□□ -0.23
RTN3-214ENST00000545432 DRICH1Q6PGQ1 229 aaPredicted RBP13.64□□□□□ -0.23
RTN3-214ENST00000545432 CHSY3Q70JA7 882 aa13.64□□□□□ -0.23
RTN3-214ENST00000545432 ABHD13Q7L211 337 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms