RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 CYP1B1Q16678 543 aa8.35□□□□□ -1.07
ATXN3-216ENST00000545170 BCL7AQ4VC05 210 aa8.35□□□□□ -1.07
ATXN3-216ENST00000545170 CNIH2Q6PI25 160 aa8.35□□□□□ -1.07
ATXN3-216ENST00000545170 ZNF439Q8NDP4 499 aa8.35□□□□□ -1.07
ATXN3-216ENST00000545170 NKX6-2Q9C056 277 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-216ENST00000545170 NEUROD4Q9HD90 331 aa8.35□□□□□ -1.07
ATXN3-216ENST00000545170 CXorf49A8MYA2 514 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 SAP18O00422 153 aaKnown RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 INHAP05111 366 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 PITPNBP48739 271 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 TEX44Q53QW1 395 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 APOBEC3FQ8IUX4 373 aaKnown RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 SAMD14Q8IZD0 417 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 AKR7LQ8NHP1 331 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 CSPG4P5Q96PW8 444 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 AGO3Q9H9G7 860 aaKnown RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 CCM2LQ9NUG4 571 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 LOC102723532A0A0G2JNH3 316 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 SMLR1H3BR10 107 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 TGOLN2O43493 480 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 POMCP01189 267 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 PPP3CBP16298 524 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 AMY2BP19961 511 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 SOX2P48431 317 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 ARHGAP11BQ3KRB8 267 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 OR4F3Q6IEY1 312 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 METTL2BQ6P1Q9 378 aaKnown RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 PARP16Q8N5Y8 322 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 ZNF454Q8N9F8 522 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 METTL2AQ96IZ6 378 aaKnown RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 ZNF701Q9NV72 531 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 KLHL9Q9P2J3 617 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 GTF2IRD1Q9UHL9 959 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 AGO1Q9UL18 857 aaKnown RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 PTPRJQ12913 1337 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 A0A1W2PQ67 120 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 PDYNP01213 254 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 ERCC1P07992 297 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 THPOP40225 353 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 SLC6A9P48067 706 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 GSTM4Q03013 218 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 AGAP7PQ5VUJ5 663 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 MEDAGQ5VYS4 303 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 MBLAC2Q68D91 279 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 NAPRTQ6XQN6 538 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 LINC00471Q8N535 108 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 TRMT10AQ8TBZ6 339 aaKnown RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 GTF3C2Q8WUA4 911 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 CHPT1Q8WUD6 406 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 STYXQ8WUJ0 223 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 MITD1Q8WV92 249 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 TXN2Q99757 166 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 PLA2G12BQ9BX93 195 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 IL21RQ9HBE5 538 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 GPR83Q9NYM4 423 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 P2RX2Q9UBL9 471 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 LAMP5Q9UJQ1 280 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 A0A087WZY1 265 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 LILRB5O75023 590 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 RAD51DO75771 328 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 CPT1AP50416 773 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 SLC8B1Q6J4K2 584 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 MON1BQ7L1V2 547 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 GRAMD2AQ8IUY3 354 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 RASGRP3Q8IV61 690 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 OR7D4Q8NG98 312 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 OR51G2Q8NGK0 314 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 OSTF1Q92882 214 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 CXorf40BQ96DE9 158 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 MARCH2Q9P0N8 246 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 TMEM98Q9Y2Y6 226 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 CCL22O00626 93 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 IMPA2O14732 288 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 F7P08709 466 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 NRLP54845 237 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 TATDN3Q17R31 274 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 BEX5Q5H9J7 111 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 OR10K2Q6IF99 312 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 NUP54Q7Z3B4 507 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 FAM185AQ8N0U4 392 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 ZFP41Q8N8Y5 198 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 OR2A12Q8NGT7 310 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 OR10G6Q8NH81 332 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 ZNF596Q8TC21 504 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 FANK1Q8TC84 345 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 C14orf79Q96F83 325 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 MICU1Q9BPX6 476 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 TAPBPLQ9BX59 468 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 SORBS1Q9BX66 1292 aaKnown RBP8.34□□□□□ -1.07
ATXN3-216ENST00000545170 HDHD5Q9BXW7 423 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 PRRG4Q9BZD6 226 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 FN3KQ9H479 309 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 PLEKHA3Q9HB20 300 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 KIAA0556O60303 1618 aa8.34□□□□□ -1.07
ATXN3-216ENST00000545170 FADS1O60427 444 aa8.34□□□□□ -1.08
ATXN3-216ENST00000545170 RCBTB2O95199 551 aa8.34□□□□□ -1.08
ATXN3-216ENST00000545170 HOXD11P31277 338 aaPredicted RBP8.34□□□□□ -1.08
ATXN3-216ENST00000545170 BRCC3P46736 316 aa8.34□□□□□ -1.08
ATXN3-216ENST00000545170 LEPRP48357 1165 aaKnown RBP8.34□□□□□ -1.08
ATXN3-216ENST00000545170 NCBP2P52298 156 aaKnown RBP eCLIP8.34□□□□□ -1.085e-7■■■■□ 25.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms