RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 MTERF3Q96E29 417 aa28.95■■■□□ 2.23
CCM2-219ENST00000544363 ADA2Q9NZK5 511 aa28.95■■■□□ 2.23
CCM2-219ENST00000544363 U3KQA8 63 aa28.95■■■□□ 2.23
CCM2-219ENST00000544363 URADA6NGE7 173 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 PDE5AO76074 875 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 LAMP1P11279 417 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 HIST1H1TP22492 207 aaPredicted RBP28.94■■■□□ 2.22
CCM2-219ENST00000544363 ATP5A1P25705 553 aaKnown RBP28.94■■■□□ 2.22
CCM2-219ENST00000544363 RAB8AP61006 207 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 AMZ1Q400G9 498 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 PIGGQ5H8A4 983 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 MANEAQ5SRI9 462 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 PLXDC1Q8IUK5 500 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 UTP15Q8TED0 518 aaKnown RBP28.94■■■□□ 2.22
CCM2-219ENST00000544363 ITCHQ96J02 903 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 DUSP26Q9BV47 211 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 FAM120CQ9NX05 1096 aaKnown RBP28.94■■■□□ 2.22
CCM2-219ENST00000544363 TMEM181Q9P2C4 612 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 MAN2B2Q9Y2E5 1009 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 ZSCAN9O15535 394 aaPredicted RBP28.94■■■□□ 2.22
CCM2-219ENST00000544363 SMIM10L1P0DMW3 83 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 ENGP17813 658 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 CD1CP29017 333 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 WNT3P56703 355 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 PLIN5Q00G26 463 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 KLC1Q07866 573 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 C6orf10Q5SRN2 563 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 SPRED1Q7Z699 444 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 ZCCHC7Q8N3Z6 543 aaKnown RBP28.94■■■□□ 2.22
CCM2-219ENST00000544363 DNAJC22Q8N4W6 341 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 ACOT4Q8N9L9 421 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 OR8K5Q8NH50 307 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 DNAJB8Q8NHS0 232 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 SMIM10Q96HG1 83 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 KCNH6Q9H252 994 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 SERHLQ9NQF3 203 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 SH3BP4Q9P0V3 963 aa28.94■■■□□ 2.22
CCM2-219ENST00000544363 A8MUI8 341 aa28.93■■■□□ 2.22
CCM2-219ENST00000544363 PRR33A8MZF0 331 aa28.93■■■□□ 2.22
CCM2-219ENST00000544363 KHNYNO15037 678 aaKnown RBP28.93■■■□□ 2.22
CCM2-219ENST00000544363 EIF2S1P05198 315 aaKnown RBP28.93■■■□□ 2.22
CCM2-219ENST00000544363 ZNF888P0CJ79 500 aaPredicted RBP28.93■■■□□ 2.22
CCM2-219ENST00000544363 SLC6A2P23975 617 aa28.93■■■□□ 2.22
CCM2-219ENST00000544363 CFHR1Q03591 330 aa28.93■■■□□ 2.22
CCM2-219ENST00000544363 HPS6Q86YV9 775 aa28.93■■■□□ 2.22
CCM2-219ENST00000544363 MCATQ8IVS2 390 aaKnown RBP28.93■■■□□ 2.22
CCM2-219ENST00000544363 CARFQ8N187 725 aa28.93■■■□□ 2.22
CCM2-219ENST00000544363 CCDC3Q9BQI4 270 aa28.93■■■□□ 2.22
CCM2-219ENST00000544363 CHRNA10Q9GZZ6 450 aa28.93■■■□□ 2.22
CCM2-219ENST00000544363 PACSIN3Q9UKS6 424 aa28.93■■■□□ 2.22
CCM2-219ENST00000544363 IGHV5-51A0A0C4DH38 117 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 HCRTR1O43613 425 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 SCN2BO60939 215 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 CIB2O75838 187 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 RASSF9O75901 435 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 SCELO95171 688 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 C9P02748 559 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 SLC7A2P52569 658 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 VSX2P58304 361 aaPredicted RBP28.92■■■□□ 2.22
CCM2-219ENST00000544363 CEACAM7Q14002 265 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 SLC9A5Q14940 896 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 HEPACAMQ14CZ8 416 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 GUSBP11Q6P575 273 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 DGLUCYQ7Z3D6 616 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 ANKRD46Q86W74 232 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 CSNK1A1LQ8N752 337 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 DNAJB14Q8TBM8 379 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 PPCDCQ96CD2 204 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 BHLHE41Q9C0J9 482 aaPredicted RBP28.92■■■□□ 2.22
CCM2-219ENST00000544363 ATAD3AQ9NVI7 634 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 ABCD2Q9UBJ2 740 aa28.92■■■□□ 2.22
CCM2-219ENST00000544363 CPED1A4D0V7 1026 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 SORBS2O94875 1100 aaKnown RBP28.91■■■□□ 2.22
CCM2-219ENST00000544363 FAM58BPP0C7Q3 252 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 BTN3A2P78410 334 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 SLAMF1Q13291 335 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 SUZ12Q15022 739 aaKnown RBP28.91■■■□□ 2.22
CCM2-219ENST00000544363 ZNF385BQ569K4 471 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 MRM1Q6IN84 353 aaKnown RBP28.91■■■□□ 2.22
CCM2-219ENST00000544363 KIAA2013Q8IYS2 634 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 CGREF1Q99674 301 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 NLNQ9BYT8 704 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 ROGDIQ9GZN7 287 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 ZMYND15Q9H091 742 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 DENND2DQ9H6A0 471 aaPredicted RBP28.91■■■□□ 2.22
CCM2-219ENST00000544363 COPS7BQ9H9Q2 264 aaPredicted RBP28.91■■■□□ 2.22
CCM2-219ENST00000544363 KLHL3Q9UH77 587 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 EME2A4GXA9 379 aaPredicted RBP28.91■■■□□ 2.22
CCM2-219ENST00000544363 SRPX2O60687 465 aaPredicted RBP28.91■■■□□ 2.22
CCM2-219ENST00000544363 ERN1O75460 977 aaKnown RBP28.91■■■□□ 2.22
CCM2-219ENST00000544363 ZBTB11O95625 1053 aaPredicted RBP28.91■■■□□ 2.22
CCM2-219ENST00000544363 B3GALT4O96024 378 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 DDCP20711 480 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 DEFB110Q30KQ9 67 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 PLA2G2CQ5R387 149 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 ANXA8L1Q5VT79 327 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 TCEAL6Q6IPX3 200 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 NANOGP8Q6NSW7 305 aa28.91■■■□□ 2.22
CCM2-219ENST00000544363 WDR74Q6RFH5 385 aaPredicted RBP28.91■■■□□ 2.22
CCM2-219ENST00000544363 USP53Q70EK8 1073 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms