RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 FAM25EA8MYX2 175 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 MSH3P20585 1137 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 ALDH4A1P30038 563 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 MMP12P39900 470 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 WASP42768 502 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 PREPP48147 710 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 PPP2R2BQ00005 443 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 EPS8Q12929 822 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 CEP68Q76N32 757 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 DPPA4Q7L190 304 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 VTCN1Q7Z7D3 282 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 P2RY8Q86VZ1 359 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 TMIEQ8NEW7 156 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 CNIH3Q8TBE1 160 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 ASB11Q8WXH4 323 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 RORBQ92753 470 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 FAM120BQ96EK7 910 aaKnown RBP14.4□□□□□ -0.1
CHFR-223ENST00000544268 TMEM246Q9BRR3 403 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 PRSS16Q9NQE7 514 aa14.4□□□□□ -0.1
CHFR-223ENST00000544268 DCAF13Q9NV06 445 aaKnown RBP14.4□□□□□ -0.1
CHFR-223ENST00000544268 CAB39Q9Y376 341 aaPredicted RBP14.4□□□□□ -0.1
CHFR-223ENST00000544268 VCANP13611 3396 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 GRXCR2A6NFK2 248 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 PTGES3LE9PB15 166 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 hCG_2039718K7EN88 272 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 SPINT1O43278 529 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 ZNF682O95780 498 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 ITGB7P26010 798 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 S100A3P33764 101 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 DCTP40126 519 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 IL1RL1Q01638 556 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 CD47Q08722 323 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 ABRQ12979 859 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 TTLL9Q3SXZ7 439 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 SNAP47Q5SQN1 464 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 PRR23BQ6ZRT6 265 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 ZNF555Q8NEP9 628 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 MCFD2Q8NI22 146 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 TTC9Q92623 222 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 CCDC90BQ9GZT6 254 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 RDH14Q9HBH5 336 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 STMN3Q9NZ72 180 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 DNAJB9Q9UBS3 223 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 OSGIN1Q9UJX0 560 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 PABPN1LA6NDY0 278 aaKnown RBP14.39□□□□□ -0.11
CHFR-223ENST00000544268 PDZK1P1A8MUH7 402 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 SLC1A7O00341 560 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 XPNPEP2O43895 674 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 ETHE1O95571 254 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 HOXB9P17482 250 aaPredicted RBP14.39□□□□□ -0.11
CHFR-223ENST00000544268 EPHA2P29317 976 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 PFN3P60673 137 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 CHIT1Q13231 466 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 DUSP7Q16829 419 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 ZFP69Q49AA0 526 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.39□□□□□ -0.11
CHFR-223ENST00000544268 LAIR1Q6GTX8 287 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 ERAP2Q6P179 960 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 WRAP53Q9BUR4 548 aaKnown RBP14.39□□□□□ -0.11
CHFR-223ENST00000544268 UGT2B28Q9BY64 529 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 MMP27Q9H306 513 aa14.39□□□□□ -0.11
CHFR-223ENST00000544268 TMEFF2Q9UIK5 374 aaPredicted RBP14.39□□□□□ -0.11
CHFR-223ENST00000544268 FADS2P1A8MWK0 482 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 E7EQ34 232 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 NUDT7P0C024 238 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 RRM2P31350 389 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 CLDN8P56748 225 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 NPTX1Q15818 432 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 LYPLAL1Q5VWZ2 237 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 ZDHHC20Q5W0Z9 365 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 LIPIQ6XZB0 460 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 GDPD3Q7L5L3 318 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 CALHM3Q86XJ0 350 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 GALNT12Q8IXK2 581 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 CSGALNACT1Q8TDX6 532 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 ELMO1Q92556 727 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 SDCCAG3Q96C92 435 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 SLC12A9Q9BXP2 914 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 REXO4Q9GZR2 422 aaKnown RBP14.38□□□□□ -0.11
CHFR-223ENST00000544268 FAM83DQ9H4H8 585 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 STON1Q9Y6Q2 735 aa14.38□□□□□ -0.11
CHFR-223ENST00000544268 TMEM265A0A087WTH1 108 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 AGAP5A6NIR3 686 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 K7EQS6 105 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 ELFN1P0C7U0 828 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 ATP1B2P14415 290 aaPredicted RBP14.37□□□□□ -0.11
CHFR-223ENST00000544268 SLC6A12P48065 614 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 CTSCP53634 463 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 SEC13P55735 322 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 B2MP61769 119 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 NCS1P62166 190 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 MAD2L1Q13257 205 aaPredicted RBP14.37□□□□□ -0.11
CHFR-223ENST00000544268 SMU1Q2TAY7 513 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 CYP4Z1Q86W10 505 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 LURAP1LQ8IV03 231 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 PLD3Q8IV08 490 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 METTL4Q8N3J2 472 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 LGALS12Q96DT0 336 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 ADPRHL2Q9NX46 363 aa14.37□□□□□ -0.11
CHFR-223ENST00000544268 KCNN3Q9UGI6 736 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms