RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 OR9A1PQ8NGU1 263 aa7.9□□□□□ -1.15
PRKAB1-207ENST00000542698 RHOXF1Q8NHV9 184 aa7.9□□□□□ -1.15
PRKAB1-207ENST00000542698 CCDC115Q96NT0 180 aa7.9□□□□□ -1.15
PRKAB1-207ENST00000542698 ELAC1Q9H777 363 aaKnown RBP7.9□□□□□ -1.15
PRKAB1-207ENST00000542698 ACOT13Q9NPJ3 140 aa7.9□□□□□ -1.15
PRKAB1-207ENST00000542698 PHPT1Q9NRX4 125 aaPredicted RBP7.9□□□□□ -1.15
PRKAB1-207ENST00000542698 SACM1LQ9NTJ5 587 aa7.9□□□□□ -1.15
PRKAB1-207ENST00000542698 MRPL39Q9NYK5 338 aaKnown RBP7.9□□□□□ -1.15
PRKAB1-207ENST00000542698 CLEC4AQ9UMR7 237 aa7.9□□□□□ -1.15
PRKAB1-207ENST00000542698 SDK1Q7Z5N4 2213 aa7.9□□□□□ -1.15
PRKAB1-207ENST00000542698 FOCADQ5VW36 1801 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 FGF19O95750 216 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 CSF2P04141 144 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 INHAP05111 366 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 PTPN2P17706 415 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 GSTM3P21266 225 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 TACR1P25103 407 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 RPL4P36578 427 aaKnown RBP7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 ETV3P41162 512 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 CLCN7P51798 805 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 HK3P52790 923 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 RGNQ15493 299 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 XKR7Q5GH72 579 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 PLPP4Q5VZY2 271 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 SBSNQ6UWP8 590 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 C17orf99Q6UX52 265 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 SNX29P2Q8IUI4 249 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 GALNT12Q8IXK2 581 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 LINC00471Q8N535 108 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 GPR26Q8NDV2 337 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 OR8J1Q8NGP2 316 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 SMG7Q92540 1137 aaKnown RBP7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 MUL1Q969V5 352 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 RGMAQ96B86 450 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 MED28Q9H204 178 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 ERVK13-1Q9NX77 482 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 GJD2Q9UKL4 321 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 ERVW-1Q9UQF0 538 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 SLC27A6Q9Y2P4 619 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 PCDHGA10Q9Y5H3 936 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 BTN3A3O00478 584 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 DYRK3O43781 588 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 TLL1O43897 1013 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 JRKO75564 520 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 SLC16A8O95907 504 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 SOD2P04179 222 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 ITGAMP11215 1152 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 AMD1P17707 334 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 RHCEP18577 417 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 STAT5AP42229 794 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 CCR8P51685 355 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 NCBP2P52298 156 aaKnown RBP eCLIP7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 ARF5P84085 180 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 NDUFA9Q16795 377 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 TMEM44Q2T9K0 475 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 NDUFAF6Q330K2 333 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 ZNF311Q5JNZ3 666 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 KIAA1161Q6NSJ0 714 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 OR7G3Q8NG95 312 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 OR6Q1Q8NGQ2 317 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 GLYATL1Q969I3 302 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 TESCQ96BS2 214 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 CXorf40BQ96DE9 158 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 FRMD6Q96NE9 622 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 WDR70Q9NW82 654 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 TAC3Q9UHF0 121 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 ABCG2Q9UNQ0 655 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 PRSS21Q9Y6M0 314 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 SMIM30A4D0T7 59 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 NPIPB15A6NHN6 443 aaPredicted RBP7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 ARHGEF33A8MVX0 844 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 DLGAP1O14490 977 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 SCAMP2O15127 329 aaKnown RBP7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 OR5F1O95221 314 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 LATS1O95835 1130 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 RB1P06400 928 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 EPHX1P07099 455 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 TYRP14679 529 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 IDSP22304 550 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 CCR7P32248 378 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 CTNNB1P35222 781 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 PIGAP37287 484 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 ZXDBP98169 803 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 LIPKQ5VXJ0 399 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 THOC7Q6I9Y2 204 aaKnown RBP7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 SMARCD3Q6STE5 483 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 B3GNT8Q7Z7M8 397 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 FAM86B1Q8N7N1 296 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 RPL3LQ92901 407 aaKnown RBP7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 DKK3Q9UBP4 350 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 IL36AQ9UHA7 158 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 ACSL6Q9UKU0 697 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 BACE2Q9Y5Z0 518 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 ADAMTSL1Q8N6G6 1762 aa7.89□□□□□ -1.15
PRKAB1-207ENST00000542698 FAM92AA1XBS5 289 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 AKAP8O43823 692 aaKnown RBP7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 LEFTY1O75610 366 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 UPK1BO75841 260 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 PTTG1O95997 202 aa7.88□□□□□ -1.15
PRKAB1-207ENST00000542698 HLA-DPB1P04440 258 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms