RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 RIDAP52758 137 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 CAPZA1P52907 286 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 PRSS12P56730 875 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 PYCR3Q53H96 274 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 TOR2AQ5JU69 321 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 RBM48Q5RL73 367 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 AGAP6Q5VW22 663 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 CLEC6AQ6EIG7 209 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 RAB12Q6IQ22 244 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 PSAPL1Q6NUJ1 521 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 TXNDC11Q6PKC3 985 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 MEX3BQ6ZN04 569 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 P2RY8Q86VZ1 359 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 PELI3Q8N2H9 469 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 TTC16Q8NEE8 873 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 SMG7Q92540 1137 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 PTERQ96BW5 349 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 ZNF707Q96C28 371 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 TIFAQ96CG3 184 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 MSANTD3Q96H12 275 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 MYO19Q96H55 970 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 ZSWIM3Q96MP5 696 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 AGAP4Q96P64 663 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 BDH2Q9BUT1 245 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 RBCK1Q9BYM8 510 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 TM6SF2Q9BZW4 377 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 POMKQ9H5K3 350 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 SMURF2Q9HAU4 748 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 IL17CQ9P0M4 197 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 MAP10Q9P2G4 905 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 FKBPLQ9UIM3 349 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 SARDHQ9UL12 918 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 PCDHB9Q9Y5E1 797 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 A0A0J9YYE9 177 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 KRT87PA6NCN2 255 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 A8MT66 165 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 TERTO14746 1132 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 PER2O15055 1255 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 POU2F2P09086 479 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 CD1DP15813 335 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 ZNF37AP17032 561 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 XPAP23025 273 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 ARSFP54793 590 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 NTHL1P78549 312 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 GRM7Q14831 915 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 FAM83EQ2M2I3 478 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 RABL3Q5HYI8 236 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 CTSL3PQ5NE16 218 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 PRMT9Q6P2P2 845 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 GDPD3Q7L5L3 318 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 ISCA2Q86U28 154 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 TMEM25Q86YD3 366 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 METTL4Q8N3J2 472 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 C10orf53Q8N6V4 93 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 ZNF555Q8NEP9 628 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 GPR156Q8NFN8 814 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 OR6K2Q8NGY2 324 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 OR6F1Q8NGZ6 308 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 TUBGCP3Q96CW5 907 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 ZHX1-C8orf76Q96EF9 292 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 SLC30A3Q99726 388 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 RBM4BQ9BQ04 359 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 RBM4Q9BWF3 364 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 BEX2Q9BXY8 128 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 PRRG3Q9BZD7 231 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 GPR61Q9BZJ8 451 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 SAV1Q9H4B6 383 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 SLA2Q9H6Q3 261 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 TNFRSF12AQ9NP84 129 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 PRDM8Q9NQV8 689 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 CMTM6Q9NX76 183 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 AASSQ9UDR5 926 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 HS3ST2Q9Y278 367 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 LAMA3Q16787 3333 aa7.69□□□□□ -1.18
PDLIM5-221ENST00000542407 A0A1W2PRG6 482 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 H0YAE9 185 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 H3BMM5 538 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 NPHS1O60500 1241 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 PAPLNO95428 1278 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 PROS1P07225 676 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 CD63P08962 238 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 QDPRP09417 244 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 HNRNPA1P09651 372 aaKnown RBP eCLIP7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 ALPIP09923 528 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 ATP5F1P24539 256 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 GKP32189 559 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 CA5AP35218 305 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 RPL35P42766 123 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 STK19P49842 368 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 ERVK-8P63133 956 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 EMX1Q04741 257 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 RPS6KA2Q15349 733 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 CTU2Q2VPK5 515 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 ANKRD34AQ69YU3 496 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 FAM109BQ6ICB4 259 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 RTL4Q6ZR62 310 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 RAB11FIP2Q7L804 512 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 SVOPQ8N4V2 548 aa7.68□□□□□ -1.18
PDLIM5-221ENST00000542407 CHDHQ8NE62 594 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms