RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 SLC26A3P40879 764 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 GDF10P55107 478 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 WNT3P56703 355 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 FASTKD3Q14CZ7 662 aaKnown RBP9.12□□□□□ -0.95
CHFR-220ENST00000541817 HKDC1Q2TB90 917 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 LGSNQ5TDP6 509 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 ZDHHC20Q5W0Z9 365 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 ZNF449Q6P9G9 518 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 ADGRD1Q6QNK2 874 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 NPNTQ6UXI9 565 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 ANKRD37Q7Z713 158 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 TBC1D21Q8IYX1 336 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 LRRC75A-AS1Q8N1F1 130 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 CLDN19Q8N6F1 224 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 PQLC3Q8N755 202 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 OR4K2Q8NGD2 314 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 C16orf52Q8NHV5 167 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 LRRC8CQ8TDW0 803 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 FBF1Q8TES7 1133 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 RNASE6Q93091 150 aaKnown RBP9.12□□□□□ -0.95
CHFR-220ENST00000541817 MRRFQ96E11 262 aaKnown RBP9.12□□□□□ -0.95
CHFR-220ENST00000541817 MIPEPQ99797 713 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 PLA2G12AQ9BZM1 189 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 ACSS3Q9H6R3 686 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 GLOD4Q9HC38 313 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 YAE1D1Q9NRH1 226 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 PLSCR2Q9NRY7 297 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.12□□□□□ -0.95
CHFR-220ENST00000541817 ARHGAP21Q5T5U3 1957 aa9.12□□□□□ -0.95
CHFR-220ENST00000541817 PINLYPA6NC86 204 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 FOXS1O43638 330 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 SRPX2O60687 465 aaPredicted RBP9.11□□□□□ -0.95
CHFR-220ENST00000541817 ATP5HO75947 161 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 ANXA5P08758 320 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 ERVK-10P10266 1014 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 RALBP11234 206 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 SSTR1P30872 391 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 CYB561P49447 251 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 MNAT1P51948 309 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 WNT3AP56704 352 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 GPX6P59796 221 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 PPIDQ08752 370 aaKnown RBP9.11□□□□□ -0.95
CHFR-220ENST00000541817 SF3A3Q12874 501 aaKnown RBP eCLIP9.11□□□□□ -0.95
CHFR-220ENST00000541817 MPP2Q14168 576 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 SETDB1Q15047 1291 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 ZKSCAN8Q15776 578 aaPredicted RBP9.11□□□□□ -0.95
CHFR-220ENST00000541817 SNCBQ16143 134 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 PDK4Q16654 411 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 MINDY4Q4G0A6 757 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 CATSPEREQ5SY80 951 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 ANKRD22Q5VYY1 191 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 PRSS57Q6UWY2 283 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 RGS9BPQ6ZS82 235 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 BZW1Q7L1Q6 419 aaKnown RBP9.11□□□□□ -0.95
CHFR-220ENST00000541817 RPS19BP1Q86WX3 136 aaKnown RBP9.11□□□□□ -0.95
CHFR-220ENST00000541817 HIPK1Q86Z02 1210 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 SLC5A8Q8N695 610 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 PLD5Q8N7P1 536 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 POGLUT1Q8NBL1 392 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 OR5K2Q8NHB8 316 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 CFAP61Q8NHU2 1237 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 SRPK1Q96SB4 655 aaKnown RBP9.11□□□□□ -0.95
CHFR-220ENST00000541817 SECISBP2Q96T21 854 aaKnown RBP9.11□□□□□ -0.95
CHFR-220ENST00000541817 PAFAH2Q99487 392 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 FERMT1Q9BQL6 677 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 ZNF670Q9BS34 389 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 SARGQ9BW04 601 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 TGIF2Q9GZN2 237 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 C10orf88Q9H8K7 445 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 MKKSQ9NPJ1 570 aaPredicted RBP9.11□□□□□ -0.95
CHFR-220ENST00000541817 INTS7Q9NVH2 962 aaKnown RBP9.11□□□□□ -0.95
CHFR-220ENST00000541817 POLG2Q9UHN1 485 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 KLF13Q9Y2Y9 288 aaPredicted RBP9.11□□□□□ -0.95
CHFR-220ENST00000541817 HEY1Q9Y5J3 304 aa9.11□□□□□ -0.95
CHFR-220ENST00000541817 SCN3AQ9NY46 2000 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 LOC285095A0A1B0GVY8 99 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 FIGNL2A6NMB9 653 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 KDM4EB2RXH2 506 aaPredicted RBP9.1□□□□□ -0.95
CHFR-220ENST00000541817 H0YGG7 62 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 KLRC4-KLRK1H3BQV0 150 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 TM9SF1O15321 606 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 BANF1O75531 89 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 ZNF189O75820 626 aaPredicted RBP9.1□□□□□ -0.95
CHFR-220ENST00000541817 DCTN3O75935 186 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 UBOX5O94941 541 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 AP2A1O95782 977 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 INHBAP08476 426 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 FOXN2P32314 431 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 ELK3P41970 407 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 NR2C2P49116 596 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 ASCL1P50553 236 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 AGFG1P52594 562 aaKnown RBP9.1□□□□□ -0.95
CHFR-220ENST00000541817 WDR4P57081 412 aaKnown RBP9.1□□□□□ -0.95
CHFR-220ENST00000541817 ARF3P61204 181 aaPredicted RBP9.1□□□□□ -0.95
CHFR-220ENST00000541817 PPIAP62937 165 aaKnown RBP9.1□□□□□ -0.95
CHFR-220ENST00000541817 SARNPP82979 210 aaKnown RBP9.1□□□□□ -0.95
CHFR-220ENST00000541817 XIAPP98170 497 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 PLGLB1Q02325 96 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 RPA4Q13156 261 aa9.1□□□□□ -0.95
CHFR-220ENST00000541817 KCNJ11Q14654 390 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms