RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CAPN10Q9HC96 672 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 LHX9Q9NQ69 397 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 NLGN3Q9NZ94 848 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 TMEM181Q9P2C4 612 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 ABCD2Q9UBJ2 740 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 BCAP29Q9UHQ4 241 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 MAN2B2Q9Y2E5 1009 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 RNF215Q9Y6U7 377 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 PKD1L2Q7Z442 2459 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 PCNX2A6NKB5 2137 aa13.57□□□□□ -0.24
CYB561A3-216ENST00000540755 ARHGAP10A1A4S6 786 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 AKAP10O43572 662 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 CTSVO60911 334 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 PDE5AO76074 875 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 KCNH1O95259 989 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 CSRP1P21291 193 aaKnown RBP13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 SLC6A2P23975 617 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 PPP1CAP62136 330 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 TRA2BP62995 288 aaKnown RBP13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 RGS1Q08116 209 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 NR1D2Q14995 579 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 HLA-BQ31612 363 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 TOR1AIP1Q5JTV8 583 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 SAMD4BQ5PRF9 694 aaKnown RBP13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 OR4C11Q6IEV9 310 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 DLEU7Q6UYE1 221 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 HPS6Q86YV9 775 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 SLC35F3Q8IY50 421 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 OR2L5Q8NG80 312 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 CDC26Q8NHZ8 85 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 SAP25Q8TEE9 199 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 COQ8BQ96D53 544 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 MTERF3Q96E29 417 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 PPM1MQ96MI6 270 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 PRPF18Q99633 342 aaKnown RBP13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 SLC39A3Q9BRY0 314 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 SORBS1Q9BX66 1292 aaKnown RBP13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 REEP4Q9H6H4 257 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 DCLRE1BQ9H816 532 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 IL1RL2Q9HB29 575 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 FAM120CQ9NX05 1096 aaKnown RBP13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 ADA2Q9NZK5 511 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 LRIT1Q9P2V4 623 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 EPHA6Q9UF33 1036 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 ATP6V1HQ9UI12 483 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 WDFY3Q8IZQ1 3526 aa13.56□□□□□ -0.24
CYB561A3-216ENST00000540755 A0A0A6YYD5 115 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 A0A0J9YVX5 310 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 RTCAO00442 366 aaKnown RBP13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 TRIM38O00635 465 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 SCN2BO60939 215 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 GBAP04062 536 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 CFIP05156 583 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 SLC35G6P0C7Q6 338 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 ALPPL2P10696 532 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 PIM1P11309 404 aaPredicted RBP13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 PVRP15151 417 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 GLB1P16278 677 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 CDH3P22223 829 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 ME2P23368 584 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 GPR3P46089 330 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 SLC7A2P52569 658 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 MAPK12P53778 367 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 TAS2R50P59544 299 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 TGM3Q08188 693 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 PDE7AQ13946 482 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 CEACAM7Q14002 265 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 SPATS1Q496A3 300 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 LRIF1Q5T3J3 769 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 CPTPQ5TA50 214 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 ZCCHC8Q6NZY4 707 aaKnown RBP13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 TRIM40Q6P9F5 258 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 ABHD17CQ6PCB6 329 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 RIPOR1Q6ZS17 1223 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 PACS2Q86VP3 889 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 OR7A2PQ8NGA2 310 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 WDR60Q8WVS4 1066 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 GAL3ST3Q96A11 431 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 ITCHQ96J02 903 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 KCNC2Q96PR1 638 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 TRAPPC9Q96Q05 1148 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 TBCDQ9BTW9 1192 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 DUSP26Q9BV47 211 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 KLHL31Q9H511 634 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 PRDM7Q9NQW5 492 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 C1GALT1Q9NS00 363 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 SLC6A14Q9UN76 642 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 EXO1Q9UQ84 846 aaKnown RBP13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 PCDHA9Q9Y5H5 950 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 FAM208BQ5VWN6 2430 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 GOLGA4Q13439 2230 aaKnown RBP13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 ARID1BQ8NFD5 2236 aaPredicted RBP13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 A0A096LPI6 279 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 URADA6NGE7 173 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 GABRR3A8MPY1 467 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 ERI3O43414 337 aaKnown RBP13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 ERN1O75460 977 aaKnown RBP13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 FURINP09958 794 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 CEACAM1P13688 526 aa13.55□□□□□ -0.24
CYB561A3-216ENST00000540755 ST6GAL1P15907 406 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms