RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 PRDX1Q06830 199 aaKnown RBP8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 ILF2Q12905 390 aaKnown RBP8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 SP140Q13342 867 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 NAB1Q13506 487 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 SLC29A2Q14542 456 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 PPP1R3AQ16821 1122 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 MROH9Q5TGP6 573 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 SHEQ5VZ18 495 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 AGTRAPQ6RW13 159 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 TRMT10CQ7L0Y3 403 aaKnown RBP8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 CMC1Q7Z7K0 106 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 ISCA2Q86U28 154 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 DOLPP1Q86YN1 238 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 KBTBD2Q8IY47 623 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 RAB42Q8N4Z0 105 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 MYRIPQ8NFW9 859 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 OR11G2Q8NGC1 345 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 GOT1L1Q8NHS2 421 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 N4BP2L2Q92802 583 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 FKBP10Q96AY3 582 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 CLEC4MQ9H2X3 399 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 WDR54Q9H977 334 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 SYNPO2LQ9H987 977 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 TIMMDC1Q9NPL8 285 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 TXLNGQ9NUQ3 528 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 INTS7Q9NVH2 962 aaKnown RBP8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 UTP6Q9NYH9 597 aaKnown RBP8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 KLK4Q9Y5K2 254 aa8.36□□□□□ -1.07
TRAPPC1-202ENST00000540486 GTF3C1Q12789 2109 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 A0A087WUV0 522 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 OR2A25A4D2G3 310 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 NPEPPSL1A6NEC2 478 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 POC1B-GALNT4F8VUJ3 575 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 SLU7O95391 586 aaKnown RBP8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 GUCA1CO95843 209 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 HPP00738 406 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 RAF1P04049 648 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 ALDOAP04075 364 aaKnown RBP8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 C2P06681 752 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 HIST1H2AGP0C0S8 130 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 SLC35E2BP0CK96 405 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 PIM1P11309 404 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 NPPBP16860 134 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 HIST1H2ADP20671 130 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 ITGAXP20702 1163 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 CHRNB4P30926 498 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 FOXL2P58012 376 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 NAE1Q13564 534 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 TSTA3Q13630 321 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 BMPR2Q13873 1038 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 CSHL1Q14406 222 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 SLC9A5Q14940 896 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 TSNQ15631 228 aaKnown RBP8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 UAP1Q16222 522 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 DEFB110Q30KQ9 67 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 C18orf21Q32NC0 220 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 ICE2Q659A1 982 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 TMEM211Q6ICI0 200 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 TLDC1Q6P9B6 456 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 OVCH1Q7RTY7 1134 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 MCATQ8IVS2 390 aaKnown RBP8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 DCAKDQ8WVC6 231 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 TMEM158Q8WZ71 300 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 PSMF1Q92530 271 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 NXNL1Q96CM4 212 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 TSPAN17Q96FV3 270 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 HIST1H2AHQ96KK5 128 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 OR4K3Q96R72 315 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 HIST1H2AJQ99878 128 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 H2AFJQ9BTM1 129 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 DPH7Q9BTV6 452 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 SGPP1Q9BX95 441 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 DERL2Q9GZP9 239 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 SLC26A1Q9H2B4 701 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 NEUROD4Q9HD90 331 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 RASSF1Q9NS23 344 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 ABCF3Q9NUQ8 709 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 EURLQ9NYK6 297 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 PTGFRNQ9P2B2 879 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 CTNNAL1Q9UBT7 734 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 TAC3Q9UHF0 121 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 MKL2Q9ULH7 1088 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 SH2B3Q9UQQ2 575 aa8.35□□□□□ -1.07
TRAPPC1-202ENST00000540486 CCDC88CQ9P219 2028 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 TLN2Q9Y4G6 2542 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 LOC105369274A0A096LPK9 316 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 LOC102723532A0A0G2JNH3 316 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 A0A0J9YVX5 310 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 NKX2-6A6NCS4 301 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 INAFM1C9JVW0 142 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 H7BY64 318 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 TAPBPO15533 448 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 ASNA1O43681 348 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 KLK8O60259 260 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 FKBP9O95302 570 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 WDPCPO95876 746 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 ONECUT2O95948 504 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 ABHD2P08910 425 aa8.34□□□□□ -1.07
TRAPPC1-202ENST00000540486 ENO2P09104 434 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms