RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 MFSD11O43934 449 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 TGM6O95932 706 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 PRKAR1AP10644 381 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 HLA-EP13747 358 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 NUDT6P53370 316 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 DPYSL2Q16555 572 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 CDKL4Q5MAI5 379 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 LRRC66Q68CR7 880 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 ARHGAP17Q68EM7 881 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 GPR155Q7Z3F1 870 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 ACOT1Q86TX2 421 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 SLC44A2Q8IWA5 706 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 SLC34A3Q8N130 599 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 ZNF565Q8N9K5 539 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 CCNYQ8ND76 341 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 ZNF548Q8NEK5 533 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 OR6P1Q8NGX9 317 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 WDR36Q8NI36 951 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 PHOSPHO2Q8TCD6 241 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 MTERF3Q96E29 417 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 OR5M11Q96RB7 305 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 PITX2Q99697 317 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 NT5C1AQ9BXI3 368 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 MED28Q9H204 178 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 NMUR1Q9HB89 426 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 EMC7Q9NPA0 242 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 PLCXD1Q9NUJ7 323 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 TAS2R16Q9NYV7 291 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 MBD2Q9UBB5 411 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 SPASTQ9UBP0 616 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 ERVK-19Q9WJR5 959 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 SLC22A7Q9Y694 548 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 CEP290O15078 2479 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 IQCMA0A1B0GVH7 501 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 VIPP01282 170 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 FGBP02675 491 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 PFKMP08237 780 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 FGF4P08620 206 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 AIF1P55008 147 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 SSX1Q16384 188 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 SNAPC1Q16533 368 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 SPDYE7PQ495Y7 208 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 KLHL22Q53GT1 634 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 TRIQKQ629K1 86 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 KANK2Q63ZY3 851 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 FRMPD2BQ6IN97 320 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 ALKBH2Q6NS38 261 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 DPP10Q8N608 796 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 TOP6BLQ8N6T0 577 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 OR11H7Q8NGC8 314 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 OR10Q1Q8NGQ4 319 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 UBA3Q8TBC4 463 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 L3HYPDHQ96EM0 354 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 CXorf58Q96LI9 332 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 KCTD15Q96SI1 283 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 MGLLQ99685 303 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 DPH7Q9BTV6 452 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 PRDM12Q9H4Q4 367 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 ZNF768Q9H5H4 540 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 PTTG3PQ9NZH4 202 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 TRPM5Q9NZQ8 1165 aa9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 CXXC1Q9P0U4 656 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-243ENST00000540387 A0A1W2PQL4 384 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 TCRBV16S1A1N1A0A5B0 115 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 FAM234BA2RU67 622 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 TRABD2BA6NFA1 517 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 QSOX1O00391 747 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 CXCR6O00574 342 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 AKAP8O43823 692 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 EIF1BO60739 113 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 HCN1O60741 890 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 PSIP1O75475 530 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 HLA-DQB1P01920 261 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 CNPP09543 421 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 LTA4HP09960 611 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 CPB1P15086 417 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 EIF1P41567 113 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 RPL6Q02878 288 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 PLD1Q13393 1074 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 PPIGQ13427 754 aaKnown RBP eCLIP9.1□□□□□ -0.951e-6■□□□□ 10.8
CTNNA1-243ENST00000540387 GTF2H3Q13889 308 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 MED22Q15528 200 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 ZNF648Q5T619 568 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 C10orf62Q5T681 223 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 RGS7BPQ6MZT1 257 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 ZNF367Q7RTV3 350 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 SPATA19Q7Z5L4 167 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 FAM217AQ8IXS0 508 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 ATP6V1C2Q8NEY4 427 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 OR10A6Q8NH74 314 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 CRELD1Q96HD1 420 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 ZNF419Q96HQ0 510 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 COQ10AQ96MF6 247 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 TMEM175Q9BSA9 504 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 HTATIP2Q9BUP3 242 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 SLC29A3Q9BZD2 475 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 MAGIXQ9H6Y5 334 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 FOLH1BQ9HBA9 442 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 KRT84Q9NSB2 600 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 BABAM2Q9NXR7 383 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms