RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 NRG1Q02297 640 aaPredicted RBP12.12□□□□□ -0.47
DDX55-206ENST00000539934 TRIP4Q15650 581 aaPredicted RBP12.12□□□□□ -0.47
DDX55-206ENST00000539934 RIPPLY2Q5TAB7 128 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 SULT1C3Q6IMI6 304 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 PRPF39Q86UA1 669 aaKnown RBP12.12□□□□□ -0.47
DDX55-206ENST00000539934 TMC8Q8IU68 726 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 ELP5Q8TE02 316 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 RAB2BQ8WUD1 216 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 SLC22A17Q8WUG5 538 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 PPP3R2Q96LZ3 170 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 TCEAL7Q9BRU2 100 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 FOXQ1Q9C009 403 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 ILKAPQ9H0C8 392 aaPredicted RBP12.12□□□□□ -0.47
DDX55-206ENST00000539934 TBC1D17Q9HA65 648 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 SARDHQ9UL12 918 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 NAALAD2Q9Y3Q0 740 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 GRIP1Q9Y3R0 1128 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 BACE2Q9Y5Z0 518 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 LRRC14BA6NHZ5 514 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 SAGE2PA6NJ88 616 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 CACNG3O60359 315 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 NR2C1P13056 603 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 ADRB3P13945 408 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 PKMP14618 531 aaKnown RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 MGAT1P26572 445 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 MAP2K6P52564 334 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 MLLT10P55197 1068 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 STX4Q12846 297 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 MPP2Q14168 576 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 FGL2Q14314 439 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 GK3PQ14409 553 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 STEAP3Q658P3 488 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 OR5M10Q6IEU7 315 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 NUDT18Q6ZVK8 323 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 C16orf62Q7Z3J2 963 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 R3HCC1LQ7Z5L2 792 aaKnown RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 ARHGAP12Q8IWW6 846 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 PRSS58Q8IYP2 241 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 UBQLNLQ8IYU4 475 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 RTL3Q8N8U3 475 aaKnown RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 OR2L5Q8NG80 312 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 CRELD1Q96HD1 420 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 FAM71F1Q96KD3 344 aaPredicted RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 BTN2A3PQ96KV6 586 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 ZNF512Q96ME7 567 aaPredicted RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 OR1F2PQ96R84 312 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 TRIM56Q9BRZ2 755 aaKnown RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 TTYH2Q9BSA4 534 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 RTKNQ9BST9 563 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 NPLQ9BXD5 320 aaPredicted RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 CPEB1Q9BZB8 566 aaKnown RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 SLC39A8Q9C0K1 460 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 SNX15Q9NRS6 342 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 DUSP22Q9NRW4 184 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 TREM2Q9NZC2 230 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 PIPSLA2A3N6 862 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 C9orf170A2RU37 121 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 RFPL4AA6NLU0 287 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 RFPL4AL1F8VTS6 287 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 CDC7O00311 574 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 ITGB1BP1O14713 200 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 SCAMP1O15126 338 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 TBX1O43435 398 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 TLR5O60602 858 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 CPNE3O75131 537 aaKnown RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 AP2A1O95782 977 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 EFEMP2O95967 443 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 SOD2P04179 222 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 JUNP05412 331 aaKnown RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 HCKP08631 526 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 CA4P22748 312 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 POU1F1P28069 291 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 FOXN2P32314 431 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 CD68P34810 354 aaPredicted RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 ANXA11P50995 505 aaKnown RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 CRADDP78560 199 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 RHDQ02161 417 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 PRPSAP1Q14558 356 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 ACOX1Q15067 660 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 GPR68Q15743 365 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 PDK4Q16654 411 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 MS4A13Q5J8X5 152 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 GPR107Q5VW38 600 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 SLC25A25Q6KCM7 469 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 PTCHD4Q6ZW05 846 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 KIAA0907Q7Z7F0 614 aaPredicted RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 GPR149Q86SP6 731 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 SLC26A11Q86WA9 606 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 DNAJA4Q8WW22 397 aaPredicted RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 RIT1Q92963 219 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 DACH2Q96NX9 599 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 TMPRSS11EQ9UL52 423 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 BAIAP2Q9UQB8 552 aa12.11□□□□□ -0.47
DDX55-206ENST00000539934 RUVBL2Q9Y230 463 aaKnown RBP12.11□□□□□ -0.47
DDX55-206ENST00000539934 TEX13CA0A0J9YWL9 993 aa12.1□□□□□ -0.47
DDX55-206ENST00000539934 ERI2A8K979 691 aaKnown RBP12.1□□□□□ -0.47
DDX55-206ENST00000539934 GPR89AB7ZAQ6 455 aa12.1□□□□□ -0.47
DDX55-206ENST00000539934 NEDD8-MDP1E9PL57 170 aa12.1□□□□□ -0.47
DDX55-206ENST00000539934 PRPF4O43172 522 aaKnown RBP eCLIP12.1□□□□□ -0.47
DDX55-206ENST00000539934 SEC14L5O43304 696 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms