RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 MST1P26927 711 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 COL8A1P27658 744 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CD96P40200 585 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 KCNC1P48547 511 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 TAS2R50P59544 299 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 DLG1Q12959 904 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 RUNX2Q13950 521 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 XKR6Q5GH73 641 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 VN1R5Q7Z5H4 357 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 SLC5A8Q8N695 610 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 PDPRQ8NCN5 879 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 GAL3ST3Q96A11 431 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 MS4A6EQ96DS6 147 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 HES7Q9BYE0 225 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CDCP1Q9H5V8 836 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ALG9Q9H6U8 611 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 PRDM9Q9NQV7 894 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 KLHL1Q9NR64 748 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 PTBP2Q9UKA9 531 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ASB1Q9Y576 335 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 SVILO95425 2214 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 POLEQ07864 2286 aa17.88■□□□□ 0.45
TNFRSF1A-212ENST00000539372 IGKV3D-11A0A0A0MRZ8 115 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ANKDD1BA6NHY2 528 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 GABRR3A8MPY1 467 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 SLC35E2BP0CK96 405 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 PLA2G16P53816 162 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 DOC2AQ14183 400 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 OR1C1Q15619 314 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 PDK4Q16654 411 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CDKL4Q5MAI5 379 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 SPINK14Q6IE38 97 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 GFRALQ6UXV0 394 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 MAMDC2Q7Z304 686 aaPredicted RBP17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ELP5Q8TE02 316 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 MRRFQ96E11 262 aaKnown RBP17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 UTP23Q9BRU9 249 aaKnown RBP17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 EHD1Q9H4M9 534 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 NT5DC2Q9H857 520 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 COPG2Q9UBF2 871 aa17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ZNF490Q9ULM2 529 aaPredicted RBP17.87■□□□□ 0.45
TNFRSF1A-212ENST00000539372 TCRBV16S1A1N1A0A5B0 115 aa17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 SAGE2PA6NJ88 616 aa17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CLEC3AO75596 197 aa17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 TBX6O95947 436 aaPredicted RBP17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CRYABP02511 175 aaKnown RBP17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 TFEBP19484 476 aa17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CD22P20273 847 aa17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 OC90Q02509 493 aaPredicted RBP17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 GUCY2DQ02846 1103 aa17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CKAP4Q07065 602 aaKnown RBP17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 C1QL3Q5VWW1 255 aa17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 C8orf74Q6P047 294 aa17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 FJX1Q86VR8 437 aa17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 MDS2Q8NDY4 140 aa17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ARMC2Q8NEN0 867 aa17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 PTCD3Q96EY7 689 aaKnown RBP17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 LRRC1Q9BTT6 524 aa17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 PITHD1Q9GZP4 211 aaPredicted RBP17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 REXO4Q9GZR2 422 aaKnown RBP17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 IGSF5Q9NSI5 407 aa17.86■□□□□ 0.45
TNFRSF1A-212ENST00000539372 SUPT3HB4E1H0 165 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 UBXN8O00124 270 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 B3GALT2O43825 422 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 SUPT3HO75486 399 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 WISP2O76076 250 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 UNC5CO95185 931 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 STSP08842 583 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 EPORP19235 508 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 GSTM2P28161 218 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CRABP2P29373 138 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CHIT1Q13231 466 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 NAB1Q13506 487 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 BMPR2Q13873 1038 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ZNF468Q5VIY5 522 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 TBC1D1Q86TI0 1168 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ISCA2Q86U28 154 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 RPS19BP1Q86WX3 136 aaKnown RBP17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 ZGRF1Q86YA3 2104 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 FAM47BQ8NA70 645 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 TMEM52Q8NDY8 209 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 NFAM1Q8NET5 270 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 DNAJB8Q8NHS0 232 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 STAG3L4Q8TBR4 150 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 SEC16BQ96JE7 1060 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 C16orf45Q96MC5 204 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 QRFPRQ96P65 431 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CD244Q9BZW8 370 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 NMRAL1Q9HBL8 299 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 PRM3Q9NNZ6 103 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 NUDT4Q9NZJ9 180 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 MMACHCQ9Y4U1 282 aa17.85■□□□□ 0.45
TNFRSF1A-212ENST00000539372 DOPEY1Q5JWR5 2465 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 LTA4HP09960 611 aaKnown RBP17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 CERS1P27544 350 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 TPP2P29144 1249 aaPredicted RBP17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 HNRNPFP52597 415 aaKnown RBP17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 RAB38P57729 211 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 IRF9Q00978 393 aa17.84■□□□□ 0.45
TNFRSF1A-212ENST00000539372 IRF8Q02556 426 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms