RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 EGFLAMQ63HQ2 1017 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 ANGPTL8Q6UXH0 198 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 EP400NLQ6ZTU2 488 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 ARHGAP22Q7Z5H3 698 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 B3GNT8Q7Z7M8 397 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 FAM124AQ86V42 546 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 CROCCP3Q8IVE0 287 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 SLC30A8Q8IWU4 369 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 C7orf61Q8IZ16 206 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 LZICQ8WZA0 190 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 THAP11Q96EK4 314 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 SLC6A16Q9GZN6 736 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 RSPH9Q9H1X1 276 aaPredicted RBP17.13■□□□□ 0.33
GNE-204ENST00000539208 RUBCNLQ9H714 662 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 PLGRKTQ9HBL7 147 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 NDUFAF4Q9P032 175 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 PSME2Q9UL46 239 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 GRXCR1A8MXD5 290 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 PTGES3LE9PB15 166 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 IL1RL1Q01638 556 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 NPRL3Q12980 569 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 IFI44LQ53G44 452 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 ST13P5Q8NFI4 369 aaPredicted RBP17.13■□□□□ 0.33
GNE-204ENST00000539208 SMPDL3AQ92484 453 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 MS4A8Q9BY19 250 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 ZNF717Q9BY31 904 aaPredicted RBP17.13■□□□□ 0.33
GNE-204ENST00000539208 GABARAPL3Q9BY60 117 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 EPS8L2Q9H6S3 715 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 MIEF1Q9NQG6 463 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 THSD1Q9NS62 852 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 DZANK1Q9NVP4 752 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 TAAR2Q9P1P5 351 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 TAC3Q9UHF0 121 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 ACSL5Q9ULC5 683 aa17.13■□□□□ 0.33
GNE-204ENST00000539208 ANTXRLA6NF34 631 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 PLPP1O14494 284 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 IFNA14P01570 189 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 CYP4B1P13584 511 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 UQCRC2P22695 453 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 RRM2P31350 389 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 CHI3L1P36222 383 aaPredicted RBP17.12■□□□□ 0.33
GNE-204ENST00000539208 TRIM23P36406 574 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 STT3AP46977 705 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 CCR8P51685 355 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 SLC35A2P78381 396 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 CDK6Q00534 326 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 PIGFQ07326 219 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 PAGE2Q7Z2X7 111 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 C2orf73Q8N5S3 287 aaPredicted RBP17.12■□□□□ 0.33
GNE-204ENST00000539208 NFKBIDQ8NI38 313 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 SPPL2AQ8TCT8 520 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 FKBP10Q96AY3 582 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 TAMM41Q96BW9 452 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 ACAT2Q9BWD1 397 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 ZDHHC4Q9NPG8 344 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 TM7SF3Q9NS93 570 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 SCN3BQ9NY72 215 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 LYVE1Q9Y5Y7 322 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 STON1Q9Y6Q2 735 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 TMX2-CTNND1H3BSU7 103 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 MID1O15344 667 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 XPNPEP2O43895 674 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 ARAFP10398 606 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 ITGA2P17301 1181 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 DDCP20711 480 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 PXNP49023 591 aaPredicted RBP17.12■□□□□ 0.33
GNE-204ENST00000539208 PCBP3P57721 371 aaKnown RBP17.12■□□□□ 0.33
GNE-204ENST00000539208 REEP5Q00765 189 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 DMPKQ09013 629 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 MAD2L1BPQ15013 274 aaPredicted RBP17.12■□□□□ 0.33
GNE-204ENST00000539208 CST6Q15828 149 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 RNF130Q86XS8 419 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 ANKRD53Q8N9V6 530 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 CHFRQ96EP1 664 aa17.12■□□□□ 0.33
GNE-204ENST00000539208 CHD9Q3L8U1 2897 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 A8MVJ9 347 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 ZNF99A8MXY4 864 aaPredicted RBP17.11■□□□□ 0.33
GNE-204ENST00000539208 TNFRSF11BO00300 401 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 PCDH8O95206 1070 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 ADH1BP00325 375 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 DDX5P17844 614 aaKnown RBP17.11■□□□□ 0.33
GNE-204ENST00000539208 EN2P19622 333 aaPredicted RBP17.11■□□□□ 0.33
GNE-204ENST00000539208 BSGP35613 385 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 GSTM5P46439 218 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 RPP38P78345 283 aaKnown RBP17.11■□□□□ 0.33
GNE-204ENST00000539208 EMX1Q04741 257 aaPredicted RBP17.11■□□□□ 0.33
GNE-204ENST00000539208 PROX2Q3B8N5 592 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 FAM109BQ6ICB4 259 aaPredicted RBP17.11■□□□□ 0.33
GNE-204ENST00000539208 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.11■□□□□ 0.33
GNE-204ENST00000539208 NUDT18Q6ZVK8 323 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 TBC1D15Q8TC07 691 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 GIPC3Q8TF64 312 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 FAR1Q8WVX9 515 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 ZNF764Q96H86 408 aaPredicted RBP17.11■□□□□ 0.33
GNE-204ENST00000539208 HRASLS5Q96KN8 279 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 QRFPRQ96P65 431 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 ZNF300Q96RE9 604 aaPredicted RBP17.11■□□□□ 0.33
GNE-204ENST00000539208 SORBS1Q9BX66 1292 aaKnown RBP17.11■□□□□ 0.33
GNE-204ENST00000539208 CCNB1IP1Q9NPC3 277 aa17.11■□□□□ 0.33
GNE-204ENST00000539208 MAP4K5Q9Y4K4 846 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms