RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 DOPEY2Q9Y3R5 2298 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 A0A096LPK6 155 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 TCRBV16S1A1N1A0A5B0 115 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 OR5H15A6NDH6 313 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 OR2W5A6NFC9 320 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 ANKUB1A6NFN9 424 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 K7EPI3 171 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 PRAMEF4O60810 478 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 CBX6O95503 412 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 B3GALT4O96024 378 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 ALDOAP04075 364 aaKnown RBP10.86□□□□□ -0.67
RTN3-209ENST00000538995 C2P06681 752 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 EPORP19235 508 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 CD22P20273 847 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 ECHS1P30084 290 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 HNRNPH1P31943 449 aaKnown RBP10.86□□□□□ -0.67
RTN3-209ENST00000538995 KCNC1P48547 511 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 SLC26A5P58743 744 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 TAS2R50P59544 299 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 BTN3A2P78410 334 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 IRF8Q02556 426 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 ACTN3Q08043 901 aaPredicted RBP10.86□□□□□ -0.67
RTN3-209ENST00000538995 CHIT1Q13231 466 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 MRPL49Q13405 166 aaKnown RBP10.86□□□□□ -0.67
RTN3-209ENST00000538995 BMPR2Q13873 1038 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 RCN2Q14257 317 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 NAA30Q147X3 362 aaPredicted RBP10.86□□□□□ -0.67
RTN3-209ENST00000538995 ACAP2Q15057 778 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 NR6A1Q15406 480 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 TERF2Q15554 542 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 FBXO48Q5FWF7 155 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 PRAMEF9Q5VWM5 478 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 METTL2BQ6P1Q9 378 aaKnown RBP10.86□□□□□ -0.67
RTN3-209ENST00000538995 KLC3Q6P597 504 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 TRIM40Q6P9F5 258 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 FAM180AQ6UWF9 173 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 VN1R5Q7Z5H4 357 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 CA13Q8N1Q1 262 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 SLC5A8Q8N695 610 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 SRFBP1Q8NEF9 429 aaKnown RBP10.86□□□□□ -0.67
RTN3-209ENST00000538995 OR1N1Q8NGS0 311 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 SUN3Q8TAQ9 357 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 KCTD4Q8WVF5 259 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 FAR1Q8WVX9 515 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 SLC44A1Q8WWI5 657 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 CCT6BQ92526 530 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 ESAMQ96AP7 390 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 NXNL1Q96CM4 212 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 ZNF354BQ96LW1 612 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 PTCHD1Q96NR3 888 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 ROGDIQ9GZN7 287 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 REXO4Q9GZR2 422 aaKnown RBP10.86□□□□□ -0.67
RTN3-209ENST00000538995 CDC42EP4Q9H3Q1 356 aaKnown RBP10.86□□□□□ -0.67
RTN3-209ENST00000538995 ABI3Q9P2A4 366 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 OPTCQ9UBM4 332 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 NTNG1Q9Y2I2 539 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 DOPEY1Q5JWR5 2465 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 POLEQ07864 2286 aa10.86□□□□□ -0.67
RTN3-209ENST00000538995 SPTBN1Q01082 2364 aaKnown RBP10.85□□□□□ -0.67
RTN3-209ENST00000538995 SAGE2PA6NJ88 616 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 UBXN8O00124 270 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 E2F3O00716 465 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 B3GALT2O43825 422 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 KLK8O60259 260 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 B4GALT2O60909 372 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 DNAJB6O75190 326 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 AGFG2O95081 481 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 KLHL2O95198 593 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 ACSL3O95573 720 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 WDPCPO95876 746 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 TBX6O95947 436 aaPredicted RBP10.85□□□□□ -0.67
RTN3-209ENST00000538995 INHBAP08476 426 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 MTHFD2P13995 350 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 EDN3P14138 238 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 EPB42P16452 691 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 CNTFP26441 200 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 TYK2P29597 1187 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 GMPRP36959 345 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 MAGEA12P43365 314 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 SERPINB9P50453 376 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 ALDH18A1P54886 795 aaKnown RBP10.85□□□□□ -0.67
RTN3-209ENST00000538995 MTTPP55157 894 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 HSD17B7P56937 341 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 RAB38P57729 211 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 IRF9Q00978 393 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 ZNF33BQ06732 778 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 ELOAQ14241 798 aaKnown RBP10.85□□□□□ -0.67
RTN3-209ENST00000538995 SETDB1Q15047 1291 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 UAP1Q16222 522 aaPredicted RBP10.85□□□□□ -0.67
RTN3-209ENST00000538995 MEP1AQ16819 746 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 TMEM35AQ53FP2 167 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 ACER2Q5QJU3 275 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 ABHD17CQ6PCB6 329 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 SCUBE1Q8IWY4 988 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 LAS2Q8IYD9 372 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 BCORP1Q8N888 145 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 CEP112Q8N8E3 955 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 CATSPER1Q8NEC5 780 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 GRHL3Q8TE85 626 aa10.85□□□□□ -0.67
RTN3-209ENST00000538995 IFT81Q8WYA0 676 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms