RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 PRSS58Q8IYP2 241 aa12.91□□□□□ -0.34
CD9-208ENST00000538834 RBMXL3Q8N7X1 1067 aaKnown RBP12.91□□□□□ -0.34
CD9-208ENST00000538834 CLEC1AQ8NC01 280 aa12.91□□□□□ -0.34
CD9-208ENST00000538834 MYRIPQ8NFW9 859 aa12.91□□□□□ -0.34
CD9-208ENST00000538834 OR52B6Q8NGF0 335 aa12.91□□□□□ -0.34
CD9-208ENST00000538834 UBLCP1Q8WVY7 318 aaPredicted RBP12.91□□□□□ -0.34
CD9-208ENST00000538834 C8orf44Q96CB5 159 aa12.91□□□□□ -0.34
CD9-208ENST00000538834 PHF21BQ96EK2 531 aa12.91□□□□□ -0.34
CD9-208ENST00000538834 PEX11GQ96HA9 241 aa12.91□□□□□ -0.34
CD9-208ENST00000538834 NSUN5Q96P11 429 aaKnown RBP12.91□□□□□ -0.34
CD9-208ENST00000538834 PARD6BQ9BYG5 372 aa12.91□□□□□ -0.34
CD9-208ENST00000538834 REXO4Q9GZR2 422 aaKnown RBP12.91□□□□□ -0.34
CD9-208ENST00000538834 ZNF71Q9NQZ8 489 aaPredicted RBP12.91□□□□□ -0.34
CD9-208ENST00000538834 GPR83Q9NYM4 423 aa12.91□□□□□ -0.34
CD9-208ENST00000538834 DCDC2Q9UHG0 476 aa12.91□□□□□ -0.34
CD9-208ENST00000538834 LGALS13Q9UHV8 139 aa12.91□□□□□ -0.34
CD9-208ENST00000538834 RNF11Q9Y3C5 154 aa12.91□□□□□ -0.34
CD9-208ENST00000538834 ZNF451Q9Y4E5 1061 aa12.91□□□□□ -0.34
CD9-208ENST00000538834 PCDHGA11Q9Y5H2 935 aa12.91□□□□□ -0.34
CD9-208ENST00000538834 G3V2L1 256 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 FOXE1O00358 373 aaPredicted RBP12.9□□□□□ -0.34
CD9-208ENST00000538834 PPP6CO00743 305 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 ERI3O43414 337 aaKnown RBP12.9□□□□□ -0.34
CD9-208ENST00000538834 PROCP04070 461 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 SERPIND1P05546 499 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 HEXBP07686 556 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 C8orf89P0DMQ9 161 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 IMPDH1P20839 514 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 HPDP32754 393 aaPredicted RBP12.9□□□□□ -0.34
CD9-208ENST00000538834 CRHR1P34998 444 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 SOX11P35716 441 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 TSFMP43897 325 aaKnown RBP12.9□□□□□ -0.34
CD9-208ENST00000538834 HERVK_113P63132 956 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 KLRB1Q12918 225 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 HIST2H2ACQ16777 129 aaPredicted RBP12.9□□□□□ -0.34
CD9-208ENST00000538834 TMEM35AQ53FP2 167 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 UNC50Q53HI1 259 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 CRB2Q5IJ48 1285 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 ZNF678Q5SXM1 525 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 VWA5B1Q5TIE3 1220 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 HIST2H2AA3Q6FI13 130 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 RIPOR1Q6ZS17 1223 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 LANCL3Q6ZV70 420 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 CPEB2Q7Z5Q1 589 aaKnown RBP12.9□□□□□ -0.34
CD9-208ENST00000538834 ANKRD37Q7Z713 158 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 AMER2Q8N7J2 671 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 HUS1BQ8NHY5 278 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 EPS8L3Q8TE67 593 aaKnown RBP12.9□□□□□ -0.34
CD9-208ENST00000538834 L3HYPDHQ96EM0 354 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 CMTM7Q96FZ5 175 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 VPS50Q96JG6 964 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 F2RL3Q96RI0 385 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 SERINC2Q96SA4 455 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 ERVK-6Q9BXR3 956 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 ROPN1BQ9BZX4 212 aaPredicted RBP12.9□□□□□ -0.34
CD9-208ENST00000538834 LHPPQ9H008 270 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 NOL11Q9H8H0 719 aaKnown RBP12.9□□□□□ -0.34
CD9-208ENST00000538834 ROPN1Q9HAT0 212 aaPredicted RBP12.9□□□□□ -0.34
CD9-208ENST00000538834 DMRT3Q9NQL9 472 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 MKS1Q9NXB0 559 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 TBK1Q9UHD2 729 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 DAPP1Q9UN19 280 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 HIVEP3Q5T1R4 2406 aa12.9□□□□□ -0.34
CD9-208ENST00000538834 FLNCQ14315 2725 aa12.9□□□□□ -0.35
CD9-208ENST00000538834 ESPL1Q14674 2120 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 SVILO95425 2214 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 POLEQ07864 2286 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 TCRBV16S1A1N1A0A5B0 115 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 EIF4E1BA6NMX2 242 aaKnown RBP12.89□□□□□ -0.35
CD9-208ENST00000538834 FAM227AF5H4B4 570 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 KLHL41O60662 606 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 SMIM24O75264 130 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 SORBS2O94875 1100 aaKnown RBP12.89□□□□□ -0.35
CD9-208ENST00000538834 CLDN9O95484 217 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 SERPINA7P05543 415 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 PRR35P0CG20 571 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 RNH1P13489 461 aaKnown RBP12.89□□□□□ -0.35
CD9-208ENST00000538834 PLA2G2AP14555 144 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 ATP5F1P24539 256 aaPredicted RBP12.89□□□□□ -0.35
CD9-208ENST00000538834 ATP5A1P25705 553 aaKnown RBP12.89□□□□□ -0.35
CD9-208ENST00000538834 CASRP41180 1078 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 PGDP52209 483 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 PRKAA2P54646 552 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 OLR1P78380 273 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 BTN3A2P78410 334 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 CUL3Q13618 768 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 C10orf62Q5T681 223 aaPredicted RBP12.89□□□□□ -0.35
CD9-208ENST00000538834 KHDRBS2Q5VWX1 349 aaKnown RBP12.89□□□□□ -0.35
CD9-208ENST00000538834 PLAG1Q6DJT9 500 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 MRM1Q6IN84 353 aaKnown RBP12.89□□□□□ -0.35
CD9-208ENST00000538834 RIBC1Q8N443 379 aaPredicted RBP12.89□□□□□ -0.35
CD9-208ENST00000538834 RNF175Q8N4F7 328 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 Q8NA96 180 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 SRFBP1Q8NEF9 429 aaKnown RBP12.89□□□□□ -0.35
CD9-208ENST00000538834 SCYL1Q96KG9 808 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 TMEM237Q96Q45 408 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 TBCDQ9BTW9 1192 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 TUBB6Q9BUF5 446 aa12.89□□□□□ -0.35
CD9-208ENST00000538834 ZBTB20Q9HC78 741 aaPredicted RBP12.89□□□□□ -0.35
CD9-208ENST00000538834 LYRM4Q9HD34 91 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms