RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 ATXN3P54252 364 aaPredicted RBP18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 VSX2P58304 361 aaPredicted RBP18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 SRSF11Q05519 484 aaKnown RBP18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 C2orf80Q0P641 193 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 COL9A2Q14055 689 aaPredicted RBP18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 CAPRIN1Q14444 709 aaKnown RBP18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 TRMT5Q32P41 509 aaKnown RBP18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 PERM1Q5SV97 790 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 DLEU7Q6UYE1 221 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 PLXDC1Q8IUK5 500 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 SCUBE1Q8IWY4 988 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 MMP21Q8N119 569 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 DNAJC22Q8N4W6 341 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 ACOT4Q8N9L9 421 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 OR8J2Q8NGG1 315 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 UTP15Q8TED0 518 aaKnown RBP18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 STARD8Q92502 1023 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 GAL3ST3Q96A11 431 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 CD180Q99467 661 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 GPATCH1Q9BRR8 931 aaKnown RBP18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 TBCDQ9BTW9 1192 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 REEP4Q9H6H4 257 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 PACSIN3Q9UKS6 424 aa18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 NUP214P35658 2090 aaPredicted RBP18.54■□□□□ 0.56
EFCAB11-202ENST00000538485 SORBS2O94875 1100 aaKnown RBP18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 FURINP09958 794 aa18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 ZNF888P0CJ79 500 aaPredicted RBP18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 ATP5A1P25705 553 aaKnown RBP18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 HPCAL1P37235 193 aa18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 TSFMP43897 325 aaKnown RBP18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 WNT3P56703 355 aa18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 PGM2L1Q6PCE3 622 aa18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 BNC2Q6ZN30 1099 aaPredicted RBP18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 IKBIPQ70UQ0 350 aa18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 CAMKMTQ7Z624 323 aa18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 ANKRD46Q86W74 232 aa18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 ARHGAP24Q8N264 748 aa18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 FAM13CQ8NE31 585 aa18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 COL25A1Q9BXS0 654 aaPredicted RBP18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 ZMYND15Q9H091 742 aa18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 SERHLQ9NQF3 203 aa18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 GID8Q9NWU2 228 aa18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 SLC7A8Q9UHI5 535 aa18.53■□□□□ 0.56
EFCAB11-202ENST00000538485 SCN2BO60939 215 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 PDE5AO76074 875 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 C9P02748 559 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 SMIM10L1P0DMW3 83 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 PDE7AQ13946 482 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 ZC3H12BQ5HYM0 836 aaKnown RBP18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 CPTPQ5TA50 214 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 WDR74Q6RFH5 385 aaPredicted RBP18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 MCATQ8IVS2 390 aaKnown RBP18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 CSNK1A1LQ8N752 337 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 ZCCHC10Q8TBK6 192 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 COQ8BQ96D53 544 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 SMIM10Q96HG1 83 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 HOPXQ9BPY8 73 aaPredicted RBP18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 CCDC3Q9BQI4 270 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 NUDT22Q9BRQ3 303 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 STARD5Q9NSY2 213 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 TEX10Q9NXF1 929 aaPredicted RBP18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 SH3BP4Q9P0V3 963 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 ATP6V1HQ9UI12 483 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 PRPF19Q9UMS4 504 aaKnown RBP18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 MAPRE3Q9UPY8 281 aa18.52■□□□□ 0.56
EFCAB11-202ENST00000538485 MN1Q10571 1320 aaPredicted RBP18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 ZSCAN9O15535 394 aaPredicted RBP18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 ZBTB11O95625 1053 aaPredicted RBP18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 CERS1P27544 350 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 MTTPP55157 894 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 BTN3A2P78410 334 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 SLAMF1Q13291 335 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 SLC9A5Q14940 896 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 PROX2Q3B8N5 592 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 ZNF385BQ569K4 471 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 MANEAQ5SRI9 462 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 C6orf10Q5SRN2 563 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 LAIR1Q6GTX8 287 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 DHDDSQ86SQ9 333 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 HPS6Q86YV9 775 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 KIAA2013Q8IYS2 634 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 ZCCHC7Q8N3Z6 543 aaKnown RBP18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 ZNF655Q8N720 491 aaPredicted RBP18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 DNAJB14Q8TBM8 379 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 PRPF18Q99633 342 aaKnown RBP18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 DUSP26Q9BV47 211 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 TRIM8Q9BZR9 551 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 SPAG4Q9NPE6 437 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 SOHLH2Q9NX45 425 aa18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 WBP11Q9Y2W2 641 aaKnown RBP18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 MRPS2Q9Y399 296 aaKnown RBP18.52■□□□□ 0.55
EFCAB11-202ENST00000538485 URADA6NGE7 173 aa18.51■□□□□ 0.55
EFCAB11-202ENST00000538485 A8MUI8 341 aa18.51■□□□□ 0.55
EFCAB11-202ENST00000538485 NPPAP01160 153 aa18.51■□□□□ 0.55
EFCAB11-202ENST00000538485 FAM58BPP0C7Q3 252 aa18.51■□□□□ 0.55
EFCAB11-202ENST00000538485 SLC6A2P23975 617 aa18.51■□□□□ 0.55
EFCAB11-202ENST00000538485 GABRA4P48169 554 aa18.51■□□□□ 0.55
EFCAB11-202ENST00000538485 KLC1Q07866 573 aa18.51■□□□□ 0.55
EFCAB11-202ENST00000538485 TGM3Q08188 693 aa18.51■□□□□ 0.55
EFCAB11-202ENST00000538485 DEFB134Q4QY38 66 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms