RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 PRPF4O43172 522 aaKnown RBP eCLIP7.9□□□□□ -1.14
SPARC-208ENST00000538026 ERI3O43414 337 aaKnown RBP7.9□□□□□ -1.14
SPARC-208ENST00000538026 B4GALT2O60909 372 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 H2AFYO75367 372 aaKnown RBP7.9□□□□□ -1.14
SPARC-208ENST00000538026 SH3BGRLO75368 114 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 KRT38O76015 456 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 SEC24DO94855 1032 aaPredicted RBP7.9□□□□□ -1.14
SPARC-208ENST00000538026 FHP07954 510 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 C8orf89P0DMQ9 161 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 PPP2R1BP30154 601 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 ST13P50502 369 aaKnown RBP7.9□□□□□ -1.14
SPARC-208ENST00000538026 PLA2G16P53816 162 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 ALDH18A1P54886 795 aaKnown RBP7.9□□□□□ -1.14
SPARC-208ENST00000538026 BTN3A2P78410 334 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 FOXK1P85037 733 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 IRF8Q02556 426 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 VWA5B1Q5TIE3 1220 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 Q6ZS92 163 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 CPEB2Q7Z5Q1 589 aaKnown RBP7.9□□□□□ -1.14
SPARC-208ENST00000538026 CUZD1Q86UP6 607 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 PTGR2Q8N8N7 351 aaPredicted RBP7.9□□□□□ -1.14
SPARC-208ENST00000538026 L3MBTL4Q8NA19 623 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 CLEC1AQ8NC01 280 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 CATSPER1Q8NEC5 780 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 NFAM1Q8NET5 270 aaPredicted RBP7.9□□□□□ -1.14
SPARC-208ENST00000538026 HUS1BQ8NHY5 278 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 BRIX1Q8TDN6 353 aaKnown RBP7.9□□□□□ -1.14
SPARC-208ENST00000538026 UCN3Q969E3 161 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 MIB2Q96AX9 1013 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 PHF21BQ96EK2 531 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 C19orf60Q96EN9 201 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 PTCD3Q96EY7 689 aaKnown RBP7.9□□□□□ -1.14
SPARC-208ENST00000538026 THOC3Q96J01 351 aaKnown RBP7.9□□□□□ -1.14
SPARC-208ENST00000538026 CDK15Q96Q40 435 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 CSF3RQ99062 836 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 CAPS2Q9BXY5 557 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 PITHD1Q9GZP4 211 aaPredicted RBP7.9□□□□□ -1.14
SPARC-208ENST00000538026 LHPPQ9H008 270 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 OR51B5Q9H339 312 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 C12orf65Q9H3J6 166 aaKnown RBP7.9□□□□□ -1.14
SPARC-208ENST00000538026 C5AR2Q9P296 337 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 CPSF2Q9P2I0 782 aaKnown RBP7.9□□□□□ -1.14
SPARC-208ENST00000538026 OPTCQ9UBM4 332 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 FETUBQ9UGM5 382 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 ANAPC2Q9UJX6 822 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 PCTPQ9UKL6 214 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 NTNG1Q9Y2I2 539 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 ZNF451Q9Y4E5 1061 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 PCDHGB7Q9Y5F8 929 aa7.9□□□□□ -1.14
SPARC-208ENST00000538026 MYO7BQ6PIF6 2116 aa7.9□□□□□ -1.15
SPARC-208ENST00000538026 NSG1A0A0A6YYJ2 146 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 MYOCOSA0A1B0GUC4 107 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 SYCE1LA8MT33 242 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 A8MT66 165 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 GOLGA8RI6L899 631 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 SAP18O00422 153 aaKnown RBP7.89□□□□□ -1.15
SPARC-208ENST00000538026 DLX3O60479 287 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 WISP2O76076 250 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 WISP1O95388 367 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 TGFB1P01137 390 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 SERPINA7P05543 415 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 RPS17P08708 135 aaKnown RBP7.89□□□□□ -1.15
SPARC-208ENST00000538026 PYGBP11216 843 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 COL6A2P12110 1019 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 GFAPP14136 432 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 EPB42P16452 691 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 TSPAN8P19075 237 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 MAOAP21397 527 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 CXCR2P25025 360 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 ATP5A1P25705 553 aaKnown RBP7.89□□□□□ -1.15
SPARC-208ENST00000538026 ITGA3P26006 1051 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 CNTFP26441 200 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 CERS1P27544 350 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 EEF1DP29692 281 aaKnown RBP7.89□□□□□ -1.15
SPARC-208ENST00000538026 HSD17B3P37058 310 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 PIK3CGP48736 1102 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 NEK2P51955 445 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 LIM2P55344 173 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 TRAF3Q13114 568 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 GTF2H2Q13888 395 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 ABRAXAS2Q15018 415 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 MINDY4Q4G0A6 757 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 UNC50Q53HI1 259 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 DEPDC1Q5TB30 811 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 GRHL2Q6ISB3 625 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 H3F3CQ6NXT2 135 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 GTF2H2CQ6P1K8 395 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 LINC00696Q6ZRV3 163 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 ABHD13Q7L211 337 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 SCUBE1Q8IWY4 988 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 KRT78Q8N1N4 520 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 SIRT6Q8N6T7 355 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 OR2L5Q8NG80 312 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 WDR20Q8TBZ3 569 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 GAL3ST3Q96A11 431 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 SEC16BQ96JE7 1060 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 OR1F2PQ96R84 312 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 BARD1Q99728 777 aaKnown RBP7.89□□□□□ -1.15
SPARC-208ENST00000538026 MAPKAP1Q9BPZ7 522 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 MRPL57Q9BQC6 102 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms