RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 THAP11Q96EK4 314 aa8.45□□□□□ -1.06
USP28-205ENST00000537706 LCORQ96JN0 433 aaPredicted RBP8.45□□□□□ -1.06
USP28-205ENST00000537706 BTBD6Q96KE9 485 aa8.45□□□□□ -1.06
USP28-205ENST00000537706 OLFM3Q96PB7 478 aa8.45□□□□□ -1.06
USP28-205ENST00000537706 RHNO1Q9BSD3 238 aa8.45□□□□□ -1.06
USP28-205ENST00000537706 AARSD1Q9BTE6 412 aaKnown RBP8.45□□□□□ -1.06
USP28-205ENST00000537706 ANGPTL4Q9BY76 406 aa8.45□□□□□ -1.06
USP28-205ENST00000537706 LANCL2Q9NS86 450 aa8.45□□□□□ -1.06
USP28-205ENST00000537706 TUBA8Q9NY65 449 aaPredicted RBP8.45□□□□□ -1.06
USP28-205ENST00000537706 LCMT1Q9UIC8 334 aa8.45□□□□□ -1.06
USP28-205ENST00000537706 TRHDEQ9UKU6 1024 aa8.45□□□□□ -1.06
USP28-205ENST00000537706 TTC7AQ9ULT0 858 aaPredicted RBP8.45□□□□□ -1.06
USP28-205ENST00000537706 CAMK2AQ9UQM7 478 aa8.45□□□□□ -1.06
USP28-205ENST00000537706 A0A0G2JMM0 328 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 A0A1W2PPB8 328 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 A0A1W2PRS3 328 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 KIR3DP1A8MWS1 328 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 OR2J2O76002 312 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 OR6B1O95007 311 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 C1orf105O95561 183 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 ENDOUP21128 410 aaKnown RBP8.44□□□□□ -1.06
USP28-205ENST00000537706 HSD17B2P37059 387 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 BDKRB1P46663 353 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 DNASE1L1P49184 302 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 RPS15AP62244 130 aaKnown RBP8.44□□□□□ -1.06
USP28-205ENST00000537706 ZNF750Q32MQ0 723 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 P3H1Q32P28 736 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 HECTD2Q5U5R9 776 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 SLC9A4Q6AI14 798 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 ITPRIPL1Q6GPH6 555 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 QSOX2Q6ZRP7 698 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 ZNF662Q6ZS27 426 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 SYDE1Q6ZW31 735 aaPredicted RBP8.44□□□□□ -1.06
USP28-205ENST00000537706 NFAM1Q8NET5 270 aaPredicted RBP8.44□□□□□ -1.06
USP28-205ENST00000537706 OR6P1Q8NGX9 317 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 ZCCHC10Q8TBK6 192 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 DNAJC1Q96KC8 554 aaKnown RBP8.44□□□□□ -1.06
USP28-205ENST00000537706 ART5Q96L15 291 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 WFIKKN1Q96NZ8 548 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 FERMT1Q9BQL6 677 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 CARD6Q9BX69 1037 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 SLC6A15Q9H2J7 730 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 ESRP2Q9H6T0 727 aaKnown RBP8.44□□□□□ -1.06
USP28-205ENST00000537706 LZTFL1Q9NQ48 299 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 KLHL28Q9NXS3 571 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 MYO6Q9UM54 1294 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 AAR2Q9Y312 384 aaKnown RBP8.44□□□□□ -1.06
USP28-205ENST00000537706 EPN1Q9Y6I3 576 aaPredicted RBP8.44□□□□□ -1.06
USP28-205ENST00000537706 A0A1W2PPV9 198 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 PSMD12O00232 456 aaPredicted RBP8.44□□□□□ -1.06
USP28-205ENST00000537706 CCL22O00626 93 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 SNPHO15079 494 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 KPNA5O15131 536 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 LMX1BO60663 402 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 HRH2P25021 359 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 CCR7P32248 378 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 GCKP35557 465 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 SOX3P41225 446 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 TRPC1P48995 793 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 NR2C2P49116 596 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 PCYT1AP49585 367 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 PRDX1Q06830 199 aaKnown RBP8.44□□□□□ -1.06
USP28-205ENST00000537706 HERC3Q15034 1050 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 TERF2Q15554 542 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 ICE2Q659A1 982 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 ZNF425Q6IV72 752 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 OPN5Q6U736 354 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 PRSS41Q7RTY9 318 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 VSIG1Q86XK7 387 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 ZNF611Q8N823 705 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 FBXO15Q8NCQ5 510 aaPredicted RBP8.44□□□□□ -1.06
USP28-205ENST00000537706 IGFBPL1Q8WX77 278 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 HS6ST2Q96MM7 605 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 FAM111AQ96PZ2 611 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 CHP1Q99653 195 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 TM9SF2Q99805 663 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 FAM129AQ9BZQ8 928 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 TAC3Q9UHF0 121 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 KCNS2Q9ULS6 477 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 REXO2Q9Y3B8 237 aaKnown RBP8.44□□□□□ -1.06
USP28-205ENST00000537706 NAALAD2Q9Y3Q0 740 aa8.44□□□□□ -1.06
USP28-205ENST00000537706 MPDZO75970 2070 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 HAT1O14929 419 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 SIAH2O43255 324 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 GPC4O75487 556 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 URI1O94763 535 aaPredicted RBP8.43□□□□□ -1.06
USP28-205ENST00000537706 IPO7O95373 1038 aaKnown RBP8.43□□□□□ -1.06
USP28-205ENST00000537706 GAB1Q13480 694 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 TMEM249Q2WGJ8 235 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 FAM174BQ3ZCQ3 159 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 BEX5Q5H9J7 111 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 TMEM214Q6NUQ4 689 aaKnown RBP8.43□□□□□ -1.06
USP28-205ENST00000537706 NPNTQ6UXI9 565 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 ZNF704Q6ZNC4 412 aaPredicted RBP8.43□□□□□ -1.06
USP28-205ENST00000537706 IRF2BP2Q7Z5L9 587 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 VRK3Q8IV63 474 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 MNS1Q8NEH6 495 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 PPP1R2P1Q96PQ5 205 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 SLC30A3Q99726 388 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 SYT11Q9BT88 431 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms