RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 DBN1Q16643 649 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 SHISA2Q6UWI4 295 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 SUSD1Q6UWL2 747 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 SYDE1Q6ZW31 735 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-217ENST00000537162 VN1R4Q7Z5H5 301 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 CPNE8Q86YQ8 564 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 SLC22A15Q8IZD6 547 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 B3GNT7Q8NFL0 401 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 HEXDCQ8WVB3 486 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 HTRA1Q92743 480 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 KAT2AQ92830 837 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 REPS1Q96D71 796 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 PTCHD1Q96NR3 888 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 SLC30A3Q99726 388 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 PIGMQ9H3S5 423 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 NECTIN3Q9NQS3 549 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 SMARCAL1Q9NZC9 954 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 FAM153AQ9UHL3 310 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 ING1Q9UK53 422 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-217ENST00000537162 PACSIN3Q9UKS6 424 aa8.64□□□□□ -1.03
CPSF7-217ENST00000537162 RUVBL2Q9Y230 463 aaKnown RBP8.64□□□□□ -1.03
CPSF7-217ENST00000537162 PRR14LQ5THK1 2151 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 A0A0A6YYK5 440 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-217ENST00000537162 TCRBV16S1A1N1A0A5B0 115 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 FRG2CA6NGY1 282 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 SMNDC1O75940 238 aaKnown RBP eCLIP8.63□□□□□ -1.03
CPSF7-217ENST00000537162 MYO1DO94832 1006 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 LRATO95237 230 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 B3GALT4O96024 378 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 AGTP01019 485 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 P04436 131 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 FHP07954 510 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 NFKB1P19838 968 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 PTNP21246 168 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 PTPN3P26045 913 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 ZFP36P26651 326 aaKnown RBP8.63□□□□□ -1.03
CPSF7-217ENST00000537162 PPP2R1BP30154 601 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 MC4RP32245 332 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 CCR7P32248 378 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 CCR8P51685 355 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 GPR143P51810 404 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 DIO3P55073 304 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 TAF1AQ15573 450 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-217ENST00000537162 HSP90AA4PQ58FG1 418 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 BEX5Q5H9J7 111 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 PRAMEF20Q5VT98 475 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 TMEM214Q6NUQ4 689 aaKnown RBP8.63□□□□□ -1.03
CPSF7-217ENST00000537162 TAS2R42Q7RTR8 314 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 PM20D2Q8IYS1 436 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 ZNF525Q8N782 197 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 KCT2Q8NC54 265 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 IPMKQ8NFU5 416 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 HMGCLL1Q8TB92 370 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 LKAAEAR1Q8TD35 194 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 FAM216AQ8WUB2 273 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 NCLNQ969V3 563 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 BTBD6Q96KE9 485 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 OR1F2PQ96R84 312 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 TUBA1CQ9BQE3 449 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 SOX7Q9BT81 388 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 UGT2B28Q9BY64 529 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 OPN3Q9H1Y3 402 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-217ENST00000537162 MRPS30Q9NP92 439 aaKnown RBP8.63□□□□□ -1.03
CPSF7-217ENST00000537162 ZFP64Q9NPA5 681 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 MYOTQ9UBF9 498 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 SH2B3Q9UQQ2 575 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 NAALAD2Q9Y3Q0 740 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 HYDINQ4G0P3 5121 aa8.63□□□□□ -1.03
CPSF7-217ENST00000537162 NINQ8N4C6 2090 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 IGKV3D-11A0A0A0MRZ8 115 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 A0A1W2PNV4 684 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 TXNDC9O14530 226 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 MSTNO14793 375 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 AP2A2O94973 939 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 EPOP01588 193 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 FTH1P02794 183 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 ARHGAP25P42331 645 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 GZMKP49863 264 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 ZNF140P52738 457 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-217ENST00000537162 NUDT6P53370 316 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 HSPA14Q0VDF9 509 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 MSLNQ13421 630 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-217ENST00000537162 PGGHGQ32M88 737 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 VWA1Q6PCB0 445 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 NPNTQ6UXI9 565 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 KIAA1328Q86T90 577 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 PEG10Q86TG7 708 aaKnown RBP8.62□□□□□ -1.03
CPSF7-217ENST00000537162 GOLM1Q8NBJ4 401 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 FBXO15Q8NCQ5 510 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-217ENST00000537162 MCOLN3Q8TDD5 553 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 SMAP2Q8WU79 429 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-217ENST00000537162 STARD4Q96DR4 205 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 CCDC34Q96HJ3 373 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 PRR14Q9BWN1 585 aa8.62□□□□□ -1.03
CPSF7-217ENST00000537162 BARX1Q9HBU1 254 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-217ENST00000537162 C16orf97H3BN30 126 aa8.61□□□□□ -1.03
CPSF7-217ENST00000537162 SHOX2O60902 331 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-217ENST00000537162 PHF2O75151 1096 aa8.61□□□□□ -1.03
CPSF7-217ENST00000537162 ACSL3O95573 720 aa8.61□□□□□ -1.03
CPSF7-217ENST00000537162 TGFAP01135 160 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms