RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 IGKV3-11P04433 115 aa3.32□□□□□ -1.88
CCDC7-208ENST00000537047 PROS1P07225 676 aa3.32□□□□□ -1.88
CCDC7-208ENST00000537047 CAPZA2P47755 286 aa3.32□□□□□ -1.88
CCDC7-208ENST00000537047 RGRP47804 291 aa3.32□□□□□ -1.88
CCDC7-208ENST00000537047 RPL34P49207 117 aaKnown RBP3.32□□□□□ -1.88
CCDC7-208ENST00000537047 ADARP55265 1226 aaKnown RBP3.32□□□□□ -1.88
CCDC7-208ENST00000537047 RIPK4P57078 832 aa3.32□□□□□ -1.88
CCDC7-208ENST00000537047 EVCP57679 992 aa3.32□□□□□ -1.88
CCDC7-208ENST00000537047 PRPF4BQ13523 1007 aaKnown RBP3.32□□□□□ -1.88
CCDC7-208ENST00000537047 SNTB1Q13884 538 aaKnown RBP3.32□□□□□ -1.88
CCDC7-208ENST00000537047 C9orf152Q5JTZ5 239 aa3.32□□□□□ -1.88
CCDC7-208ENST00000537047 RFWD3Q6PCD5 774 aa3.32□□□□□ -1.88
CCDC7-208ENST00000537047 TRMT11Q7Z4G4 463 aaKnown RBP3.32□□□□□ -1.88
CCDC7-208ENST00000537047 SEPT1Q8WYJ6 367 aa3.32□□□□□ -1.88
CCDC7-208ENST00000537047 SPATA33Q96N06 139 aa3.32□□□□□ -1.88
CCDC7-208ENST00000537047 ALKBH3Q96Q83 286 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-208ENST00000537047 MCCC1Q96RQ3 725 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-208ENST00000537047 MAPKAP1Q9BPZ7 522 aa3.32□□□□□ -1.88
CCDC7-208ENST00000537047 PLEKHA3Q9HB20 300 aa3.32□□□□□ -1.88
CCDC7-208ENST00000537047 XAB2Q9HCS7 855 aaKnown RBP3.32□□□□□ -1.88
CCDC7-208ENST00000537047 ITGA11Q9UKX5 1188 aa3.32□□□□□ -1.88
CCDC7-208ENST00000537047 PASKQ96RG2 1323 aa3.32□□□□□ -1.88
CCDC7-208ENST00000537047 TRBC2A0A5B9 178 aa3.31□□□□□ -1.88
CCDC7-208ENST00000537047 PSMD10O75832 226 aa3.31□□□□□ -1.88
CCDC7-208ENST00000537047 MYL6BP14649 208 aa3.31□□□□□ -1.88
CCDC7-208ENST00000537047 LIMK1P53667 647 aa3.31□□□□□ -1.88
CCDC7-208ENST00000537047 PEX3P56589 373 aa3.31□□□□□ -1.88
CCDC7-208ENST00000537047 RBPJQ06330 500 aa3.31□□□□□ -1.88
CCDC7-208ENST00000537047 ALCAMQ13740 583 aa3.31□□□□□ -1.88
CCDC7-208ENST00000537047 RALBP1Q15311 655 aa3.31□□□□□ -1.88
CCDC7-208ENST00000537047 ECSCRQ19T08 205 aa3.31□□□□□ -1.88
CCDC7-208ENST00000537047 LRRC37A5PQ49AS3 106 aa3.31□□□□□ -1.88
CCDC7-208ENST00000537047 C9orf129Q5T035 196 aaKnown RBP3.31□□□□□ -1.88
CCDC7-208ENST00000537047 CFAP161Q6P656 301 aa3.31□□□□□ -1.88
CCDC7-208ENST00000537047 ZNRF1Q8ND25 227 aa3.31□□□□□ -1.88
CCDC7-208ENST00000537047 RCHY1Q96PM5 261 aa3.31□□□□□ -1.88
CCDC7-208ENST00000537047 NIP7Q9Y221 180 aaKnown RBP eCLIP3.31□□□□□ -1.88
CCDC7-208ENST00000537047 CPQQ9Y646 472 aa3.31□□□□□ -1.88
CCDC7-208ENST00000537047 E5RGE8 158 aa3.3□□□□□ -1.88
CCDC7-208ENST00000537047 NR2F1P10589 423 aa3.3□□□□□ -1.88
CCDC7-208ENST00000537047 SPRP35270 261 aaPredicted RBP3.3□□□□□ -1.88
CCDC7-208ENST00000537047 HSD17B3P37058 310 aa3.3□□□□□ -1.88
CCDC7-208ENST00000537047 UCNP55089 124 aa3.3□□□□□ -1.88
CCDC7-208ENST00000537047 MTCP1P56278 107 aa3.3□□□□□ -1.88
CCDC7-208ENST00000537047 RPS27AP62979 156 aaKnown RBP3.3□□□□□ -1.88
CCDC7-208ENST00000537047 CKAP4Q07065 602 aaKnown RBP3.3□□□□□ -1.88
CCDC7-208ENST00000537047 PCK2Q16822 640 aa3.3□□□□□ -1.88
CCDC7-208ENST00000537047 ARMC4Q5T2S8 1044 aa3.3□□□□□ -1.88
CCDC7-208ENST00000537047 KRTAP5-7Q6L8G8 165 aa3.3□□□□□ -1.88
CCDC7-208ENST00000537047 ENOSF1Q7L5Y1 443 aa3.3□□□□□ -1.88
CCDC7-208ENST00000537047 PRPF39Q86UA1 669 aaKnown RBP3.3□□□□□ -1.88
CCDC7-208ENST00000537047 SPSB1Q96BD6 273 aa3.3□□□□□ -1.88
CCDC7-208ENST00000537047 GDAP1L1Q96MZ0 367 aa3.3□□□□□ -1.88
CCDC7-208ENST00000537047 MGAT4AQ9UM21 535 aa3.3□□□□□ -1.88
CCDC7-208ENST00000537047 NSG2Q9Y328 171 aa3.3□□□□□ -1.88
CCDC7-208ENST00000537047 ZSCAN5CA6NGD5 496 aaPredicted RBP3.29□□□□□ -1.88
CCDC7-208ENST00000537047 ANHXE9PGG2 379 aa3.29□□□□□ -1.88
CCDC7-208ENST00000537047 FBP2O00757 339 aa3.29□□□□□ -1.88
CCDC7-208ENST00000537047 IFI35P80217 286 aaPredicted RBP3.29□□□□□ -1.88
CCDC7-208ENST00000537047 MFSD4BQ5TF39 518 aa3.29□□□□□ -1.88
CCDC7-208ENST00000537047 ARMCX5Q6P1M9 558 aa3.29□□□□□ -1.88
CCDC7-208ENST00000537047 COX8CQ7Z4L0 72 aa3.29□□□□□ -1.88
CCDC7-208ENST00000537047 PRUNE1Q86TP1 453 aa3.29□□□□□ -1.88
CCDC7-208ENST00000537047 APCDD1Q8J025 514 aa3.29□□□□□ -1.88
CCDC7-208ENST00000537047 VNN3Q9NY84 501 aa3.29□□□□□ -1.88
CCDC7-208ENST00000537047 ADAM22Q9P0K1 906 aa3.29□□□□□ -1.88
CCDC7-208ENST00000537047 SATB2Q9UPW6 733 aa3.29□□□□□ -1.88
CCDC7-208ENST00000537047 PLEKHA6Q9Y2H5 1048 aa3.29□□□□□ -1.88
CCDC7-208ENST00000537047 RHBDL1O75783 438 aa3.28□□□□□ -1.88
CCDC7-208ENST00000537047 ANGPTL1O95841 491 aa3.28□□□□□ -1.88
CCDC7-208ENST00000537047 CD1EP15812 388 aa3.28□□□□□ -1.88
CCDC7-208ENST00000537047 ZNF542PQ5EBM4 170 aa3.28□□□□□ -1.88
CCDC7-208ENST00000537047 ZRANB3Q5FWF4 1079 aa3.28□□□□□ -1.88
CCDC7-208ENST00000537047 VWA2Q5GFL6 755 aa3.28□□□□□ -1.88
CCDC7-208ENST00000537047 FUT10Q6P4F1 479 aa3.28□□□□□ -1.88
CCDC7-208ENST00000537047 ZNF600Q6ZNG1 722 aa3.28□□□□□ -1.88
CCDC7-208ENST00000537047 MFN1Q8IWA4 741 aa3.28□□□□□ -1.88
CCDC7-208ENST00000537047 HDAC11Q96DB2 347 aa3.28□□□□□ -1.88
CCDC7-208ENST00000537047 LRRC3BQ96PB8 259 aa3.28□□□□□ -1.88
CCDC7-208ENST00000537047 PCDHB18PQ96TA0 734 aa3.28□□□□□ -1.88
CCDC7-208ENST00000537047 SNX25Q9H3E2 840 aa3.28□□□□□ -1.88
CCDC7-208ENST00000537047 IARS2Q9NSE4 1012 aaKnown RBP3.28□□□□□ -1.88
CCDC7-208ENST00000537047 EXOC1Q9NV70 894 aa3.28□□□□□ -1.88
CCDC7-208ENST00000537047 BCCIPQ9P287 314 aaKnown RBP eCLIP3.28□□□□□ -1.88
CCDC7-208ENST00000537047 MYBL1P10243 752 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 GOT1P17174 413 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 CTNNA2P26232 953 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 MEOX2P50222 304 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 RAB28P51157 221 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 HMGCS2P54868 508 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 GRB14Q14449 540 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 BECN1Q14457 450 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 ERMARDQ5T6L9 678 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 ZNF544Q6NX49 715 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 MOXD1Q6UVY6 613 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 PRSS35Q8N3Z0 413 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 ZNF525Q8N782 197 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 CD99L2Q8TCZ2 262 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 P2RX5Q93086 422 aa3.27□□□□□ -1.89
CCDC7-208ENST00000537047 ZNF799Q96GE5 643 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms