RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ZC3HC1Q86WB0 502 aaKnown RBP18.4■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ZNF227Q86WZ6 799 aa18.4■□□□□ 0.54
TNFRSF1B-204ENST00000536782 KLHL7Q8IXQ5 586 aa18.4■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ARMC10Q8N2F6 343 aa18.4■□□□□ 0.54
TNFRSF1B-204ENST00000536782 MTFMTQ96DP5 389 aaKnown RBP18.4■□□□□ 0.54
TNFRSF1B-204ENST00000536782 MMACHCQ9Y4U1 282 aa18.4■□□□□ 0.54
TNFRSF1B-204ENST00000536782 OARD1Q9Y530 152 aa18.4■□□□□ 0.54
TNFRSF1B-204ENST00000536782 PSAT1Q9Y617 370 aa18.4■□□□□ 0.54
TNFRSF1B-204ENST00000536782 FAM95CA0A1B0GW59 222 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 C4orf51C9J302 202 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 H2AFYO75367 372 aaKnown RBP18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 GNAZP19086 355 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 CLCN2P51788 898 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 STXBP1P61764 594 aaKnown RBP18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 BTN3A2P78410 334 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 HSF1Q00613 529 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 DR1Q01658 176 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 MGAT5Q09328 741 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 ZNF460Q14592 562 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 RNFT1Q5M7Z0 435 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 FRA10AC1Q70Z53 315 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 ANKMY2Q8IV38 441 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 POGLUT1Q8NBL1 392 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 B3GNT7Q8NFL0 401 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 AGAP11Q8TF27 550 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 FAR2Q96K12 515 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 RUNDC3BQ96NL0 473 aa18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 KLF13Q9Y2Y9 288 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF1B-204ENST00000536782 MED13LQ71F56 2210 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 TRBV11-1A0A0K0K1C0 115 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 PRRG2O14669 202 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 ZNHIT1O43257 154 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 WDR47O94967 919 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 C1GALT1C1LP0DN25 315 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 CDSNQ15517 529 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 TERF2Q15554 542 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 ADAMTSL2Q86TH1 951 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 DOLPP1Q86YN1 238 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 CHERPQ8IWX8 916 aaKnown RBP18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 EID3Q8N140 333 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 APCDD1LQ8NCL9 501 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 TTLQ8NG68 377 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 PHF10Q8WUB8 498 aaKnown RBP18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 GAL3ST3Q96A11 431 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 VPS39Q96JC1 886 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 AICDAQ9GZX7 198 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 TRMT1Q9NXH9 659 aaKnown RBP18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 CTNNAL1Q9UBT7 734 aa18.38■□□□□ 0.53
TNFRSF1B-204ENST00000536782 SETD2Q9BYW2 2564 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 E9PLN8 166 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 KLRC4-KLRK1H3BQV0 150 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 MYO1DO94832 1006 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 GDF5P43026 501 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 MEOX1P50221 254 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 TAS2R39P59534 338 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 PDIA2Q13087 525 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 TSNQ15631 228 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 TMIGD1Q6UXZ0 262 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 SLCO4C1Q6ZQN7 724 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 NCCRP1Q6ZVX7 275 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 SCUBE1Q8IWY4 988 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 TMEM156Q8N614 296 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 FBXO36Q8NEA4 188 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 ANKRD49Q8WVL7 239 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 CCT6BQ92526 530 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 CAPZA3Q96KX2 299 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 LURAP1Q96LR2 239 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 VKORC1Q9BQB6 163 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 NPLQ9BXD5 320 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 TRIM8Q9BZR9 551 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 PNO1Q9NRX1 252 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 NSMCE4AQ9NXX6 385 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 MOCS1Q9NZB8 636 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 FBXW2Q9UKT8 454 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 ASB1Q9Y576 335 aa18.37■□□□□ 0.53
TNFRSF1B-204ENST00000536782 A0A088AWK7 358 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 C19orf84I3L1E1 186 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 CLDN4O14493 209 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 TFECO14948 347 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 ERI3O43414 337 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 SEC31AO94979 1220 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 ZNF10P21506 573 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 GSTM2P28161 218 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 SLC6A12P48065 614 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 HSD17B7P56937 341 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 RUNX2Q13950 521 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 SLBPQ14493 270 aaKnown RBP eCLIP18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 C18orf21Q32NC0 220 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 C3P1Q6ZMU1 363 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 CEP97Q8IW35 865 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 SULF2Q8IWU5 870 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 KLHDC8AQ8IYD2 350 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 CYP4Z2PQ8N1L4 340 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 KRT78Q8N1N4 520 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 RHBDF1Q96CC6 855 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 MS4A6EQ96DS6 147 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 VMP1Q96GC9 406 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 CAPS2Q9BXY5 557 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 POPDC3Q9HBV1 291 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms