RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 CSF3RQ99062 836 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 SPATA9Q9BWV2 254 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 NKX2-4Q9H2Z4 354 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 TBC1D23Q9NUY8 699 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 ATAD3AQ9NVI7 634 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 WDR37Q9Y2I8 494 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 TSC22D4Q9Y3Q8 395 aa12.8□□□□□ -0.36
VPS33B-202ENST00000535906 DNAH14Q0VDD8 3507 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 PRR23AA6NEV1 266 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 KMOO15229 486 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 GPR37L1O60883 481 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 IL3P08700 152 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 ETFAP13804 333 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 PCMT1P22061 227 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 TPP2P29144 1249 aaPredicted RBP12.79□□□□□ -0.36
VPS33B-202ENST00000535906 TRIM23P36406 574 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 SEC13P55735 322 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 PHEXP78562 749 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 IL5RAQ01344 420 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 PIGFQ07326 219 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 LRRC74AQ0VAA2 488 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 CDK5R2Q13319 367 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 RAPSNQ13702 412 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 CYP2A13Q16696 494 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 IQCCQ4KMZ1 466 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 FAM180BQ6P0A1 224 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 Q6ZNX1 250 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 GALNT5Q7Z7M9 940 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 SLC9B2Q86UD5 537 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 KRT78Q8N1N4 520 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 SETD9Q8NE22 299 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 FKBP10Q96AY3 582 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 SLC35A5Q9BS91 424 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 WDR26Q9H7D7 661 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 PAK1IP1Q9NWT1 392 aaPredicted RBP12.79□□□□□ -0.36
VPS33B-202ENST00000535906 ACSL6Q9UKU0 697 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 BAG5Q9UL15 447 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 FEZF1A0PJY2 475 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 M0QX08 132 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 PLPP1O14494 284 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 C5AR1P21730 350 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 TIE1P35590 1138 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 DAPP51397 102 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 CYP4F2P78329 520 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 KCNJ10P78508 379 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 ARHGAP19Q14CB8 494 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 AGERQ15109 404 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 ITPRIPL2Q3MIP1 535 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 ANKDD1AQ495B1 522 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 KDM4DQ6B0I6 523 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 KIAA1211LQ6NV74 962 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 OR5AK3PQ8NH89 298 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 C7orf34Q96L11 122 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 CDCA3Q99618 268 aaPredicted RBP12.79□□□□□ -0.36
VPS33B-202ENST00000535906 FUNDC2Q9BWH2 189 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 TMEM121BQ9BXQ6 578 aaPredicted RBP12.79□□□□□ -0.36
VPS33B-202ENST00000535906 DGCR6LQ9BY27 220 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 LMAN2LQ9H0V9 348 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 EXD2Q9NVH0 621 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 WARS2Q9UGM6 360 aaKnown RBP12.79□□□□□ -0.36
VPS33B-202ENST00000535906 PCDHGB1Q9Y5G3 927 aa12.79□□□□□ -0.36
VPS33B-202ENST00000535906 DNMT3AQ9Y6K1 912 aaPredicted RBP12.79□□□□□ -0.36
VPS33B-202ENST00000535906 A0A1W2PPV9 198 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 PTGES3LE9PB15 166 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 H7BY64 318 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 K7EQS6 105 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 RTCAO00442 366 aaKnown RBP12.78□□□□□ -0.36
VPS33B-202ENST00000535906 MAGEB3O15480 346 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 ADH1BP00325 375 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 SLC35G4P0C7Q5 338 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 ACP5P13686 325 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 DNAJA1P31689 397 aaKnown RBP12.78□□□□□ -0.36
VPS33B-202ENST00000535906 PCGF2P35227 344 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 KEAP1Q14145 624 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 PPP2R2DQ66LE6 453 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 LINC01555Q8NAE3 123 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 TP53I13Q8NBR0 393 aaPredicted RBP12.78□□□□□ -0.36
VPS33B-202ENST00000535906 C11orf65Q8NCR3 313 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 CNIH3Q8TBE1 160 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 ABTB1Q969K4 478 aaPredicted RBP12.78□□□□□ -0.36
VPS33B-202ENST00000535906 PRAP1Q96NZ9 151 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 ZNF717Q9BY31 904 aaPredicted RBP12.78□□□□□ -0.36
VPS33B-202ENST00000535906 SLC6A16Q9GZN6 736 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 MCOLN1Q9GZU1 580 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 MKRN2Q9H000 416 aaKnown RBP12.78□□□□□ -0.36
VPS33B-202ENST00000535906 HSPE1-MOB4S4R3N1 261 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 HEATR5BQ9P2D3 2071 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 ANKDD1BA6NHY2 528 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 TNFRSF21O75509 655 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 ANGPTL1O95841 491 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 RPN2P04844 631 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 FPR1P21462 350 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 KIR2DL1P43626 348 aaPredicted RBP12.78□□□□□ -0.36
VPS33B-202ENST00000535906 BMXP51813 675 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 C21orf59P57076 290 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 HYAL1Q12794 435 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 MLF2Q15773 248 aaPredicted RBP12.78□□□□□ -0.36
VPS33B-202ENST00000535906 SLC5A12Q1EHB4 618 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 ANKRD54Q6NXT1 300 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 NUDT18Q6ZVK8 323 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms