RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	CCDC138	Q96M89	665 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	ZIM3	Q96PE6	472 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	LPAR4	Q99677	370 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	OLFM1	Q99784	485 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	ENKD1	Q9H0I2	346 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	ANKH	Q9HCJ1	492 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	CCDC177	Q9NQR7	707 aa	Predicted RBP	10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	LANCL2	Q9NS86	450 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	SH3BGRL2	Q9UJC5	107 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	DCHS2	Q6V1P9	2916 aa		10.85	□□□□□ -0.67
CTNND1-238	ENST00000534647	ZCWPW2	A0A1B0GU75	182 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	TCRBV7S3A2	A0A539	114 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	SDR42E2	A6NKP2	422 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	NPIPA5	E9PKD4	350 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647		E9PLN8	166 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	C19orf84	I3L1E1	186 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	AVIL	O75366	819 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	FBXO24	O75426	580 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	SYF2	O95926	243 aa	Known RBP	10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	SNRPB2	P08579	225 aa	Known RBP	10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	IL1RN	P18510	177 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	CCND1	P24385	295 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	MEF2A	Q02078	507 aa	Predicted RBP	10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	USP10	Q14694	798 aa	Known RBP	10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	HERC3	Q15034	1050 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	CDSN	Q15517	529 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	NSDHL	Q15738	373 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	SFT2D3	Q587I9	215 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	MFSD4B	Q5TF39	518 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	FCRLB	Q6BAA4	426 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	ZNF470	Q6ECI4	717 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	SLC25A25	Q6KCM7	469 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	LRRC8E	Q6NSJ5	796 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	NIPAL1	Q6NVV3	410 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	PAPD4	Q6PIY7	484 aa	Known RBP	10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	SPNS3	Q6ZMD2	512 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	CROCCP2	Q86T23	111 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	PDSS2	Q86YH6	399 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	CHERP	Q8IWX8	916 aa	Known RBP	10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	SHISA5	Q8N114	240 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	EID3	Q8N140	333 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	GHDC	Q8N2G8	530 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	AFAP1L2	Q8N4X5	818 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	KCT2	Q8NC54	265 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	FAM98A	Q8NCA5	519 aa	Known RBP	10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	MCU	Q8NE86	351 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	CD200R1	Q8TD46	325 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	SLC13A3	Q8WWT9	602 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	DMRTA2	Q96SC8	542 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	VKORC1	Q9BQB6	163 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	CCDC68	Q9H2F9	335 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	CLK4	Q9HAZ1	481 aa	Known RBP	10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	HCN3	Q9P1Z3	774 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	PFDN2	Q9UHV9	154 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	MCM8	Q9UJA3	840 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	NPIPA1	Q9UND3	350 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	PCNX1	Q96RV3	2341 aa		10.84	□□□□□ -0.67
CTNND1-238	ENST00000534647	ADGRG4	Q8IZF6	3080 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	OR2W5	A6NFC9	320 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	GABRR3	A8MPY1	467 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	SGK494	L7N484	410 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	ADAM10	O14672	748 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	SLC16A5	O15375	505 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	LCMT2	O60294	686 aa	Known RBP	10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	MAN1A2	O60476	641 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	NPPB	P16860	134 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	TRHR	P34981	398 aa	Predicted RBP	10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	ARL4C	P56559	192 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	SLC26A5	P58743	744 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	TAS2R50	P59544	299 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	TBPL1	P62380	186 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	ACTN3	Q08043	901 aa	Predicted RBP	10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	CTBP1	Q13363	440 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	THOC5	Q13769	683 aa	Known RBP	10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	ABRAXAS2	Q15018	415 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	CEP85L	Q5SZL2	805 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	RNASEH2B	Q5TBB1	312 aa	Known RBP	10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	CAPN13	Q6MZZ7	669 aa	Predicted RBP	10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	UBE2R2	Q712K3	238 aa	Predicted RBP	10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	SPATC1	Q76KD6	591 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	GALNTL5	Q7Z4T8	443 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	STRA8	Q7Z7C7	330 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	ASPG	Q86U10	573 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	SLC26A11	Q86WA9	606 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	C17orf64	Q86WR6	236 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	RPS19BP1	Q86WX3	136 aa	Known RBP	10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	DOLPP1	Q86YN1	238 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	DENND6A	Q8IWF6	608 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	MFSD9	Q8NBP5	474 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	ABHD11	Q8NFV4	315 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	OR4K1	Q8NGD4	311 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	CALML6	Q8TD86	181 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	NINJ1	Q92982	152 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	GPR21	Q99679	349 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	MACROD1	Q9BQ69	325 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	SGPP1	Q9BX95	441 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	HES7	Q9BYE0	225 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	TXLNGY	Q9BZA5	131 aa		10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	XAB2	Q9HCS7	855 aa	Known RBP	10.83	□□□□□ -0.68
CTNND1-238	ENST00000534647	KLHL1	Q9NR64	748 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms