RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 DBX2Q6ZNG2 339 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 COMMD2Q86X83 199 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 MB21D2Q8IYB1 491 aaPredicted RBP4.28□□□□□ -1.72
C11orf54-213ENST00000533585 KRT222Q8N1A0 295 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 SLC5A8Q8N695 610 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 HORMAD2Q8N7B1 307 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 BMPERQ8N8U9 685 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 ASCC1Q8N9N2 400 aaKnown RBP4.28□□□□□ -1.72
C11orf54-213ENST00000533585 TERB1Q8NA31 727 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 THAP8Q8NA92 274 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 LKAAEAR1Q8TD35 194 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 GRHL3Q8TE85 626 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 CCDC12Q8WUD4 166 aaPredicted RBP4.28□□□□□ -1.72
C11orf54-213ENST00000533585 PDCD6IPQ8WUM4 868 aaKnown RBP4.28□□□□□ -1.72
C11orf54-213ENST00000533585 SMPDL3BQ92485 455 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 GLYATL1Q969I3 302 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 SGK3Q96BR1 496 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 ZNF707Q96C28 371 aaPredicted RBP4.28□□□□□ -1.72
C11orf54-213ENST00000533585 RAB39BQ96DA2 213 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 LGALS12Q96DT0 336 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 COQ2Q96H96 371 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 HPDLQ96IR7 371 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 KCNS3Q9BQ31 491 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 RTP3Q9BQQ7 232 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 MMTAG2Q9BU76 263 aaKnown RBP4.28□□□□□ -1.72
C11orf54-213ENST00000533585 SF3B5Q9BWJ5 86 aaKnown RBP4.28□□□□□ -1.72
C11orf54-213ENST00000533585 KLC2Q9H0B6 622 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 GANQ9H2C0 597 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 SEMA6AQ9H2E6 1030 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 DCTPP1Q9H773 170 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 ELOVL3Q9HB03 270 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 ZNF160Q9HCG1 818 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 SLC2A4RGQ9NR83 387 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 PHPT1Q9NRX4 125 aaPredicted RBP4.28□□□□□ -1.72
C11orf54-213ENST00000533585 DDX28Q9NUL7 540 aaKnown RBP4.28□□□□□ -1.72
C11orf54-213ENST00000533585 IL20Q9NYY1 176 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 STX18Q9P2W9 335 aaKnown RBP4.28□□□□□ -1.72
C11orf54-213ENST00000533585 MTRF1LQ9UGC7 380 aaKnown RBP4.28□□□□□ -1.72
C11orf54-213ENST00000533585 CD300AQ9UGN4 299 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 WDR83OSQ9Y284 106 aa4.28□□□□□ -1.72
C11orf54-213ENST00000533585 TRAV18A0A075B6X5 111 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.27□□□□□ -1.73
C11orf54-213ENST00000533585 A0A0J9YYE9 177 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 TEX51A0A1B0GUA7 166 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 MYOCOSA0A1B0GUC4 107 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 ESYT2A0FGR8 921 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 WDR27A2RRH5 827 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 TUBAL3A6NHL2 446 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 CASTOR2A6NHX0 329 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 MARCH11A6NNE9 402 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 GABRR3A8MPY1 467 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 C12orf71A8MTZ7 269 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 TMCO5BA8MYB1 307 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 HIP1O00291 1037 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 RNASET2O00584 256 aaKnown RBP4.27□□□□□ -1.73
C11orf54-213ENST00000533585 POLR1CO15160 346 aaPredicted RBP4.27□□□□□ -1.73
C11orf54-213ENST00000533585 MATN3O15232 486 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 KCNN4O15554 427 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 OR1F1O43749 312 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 UGDHO60701 494 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 CLN5O75503 358 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 GRAP2O75791 330 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 NCR1O76036 304 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 CAVIN2O95810 425 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 TRBC1P01850 177 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 APRTP07741 180 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 LYNP07948 512 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 H2AFB1P0C5Y9 115 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 H2AFB2P0C5Z0 115 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 UMPSP11172 480 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 PRPS2P11908 318 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 GOT1P17174 413 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 SRMP19623 302 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 ACO1P21399 889 aaKnown RBP4.27□□□□□ -1.73
C11orf54-213ENST00000533585 PCSK6P29122 969 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 DCTDP32321 178 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 CLDN15P56746 228 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 TMPRSS3P57727 454 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 HHEXQ03014 270 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 ENPEPQ07075 957 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 DLX2Q07687 328 aaPredicted RBP4.27□□□□□ -1.73
C11orf54-213ENST00000533585 FOXL1Q12952 345 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 ZNF177Q13360 481 aaPredicted RBP4.27□□□□□ -1.73
C11orf54-213ENST00000533585 MSLNQ13421 630 aaPredicted RBP4.27□□□□□ -1.73
C11orf54-213ENST00000533585 CDH18Q13634 790 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 ENPP2Q13822 863 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 HERC3Q15034 1050 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 CAMK4Q16566 473 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 PARP6Q2NL67 630 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 XKR7Q5GH72 579 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 ARMCX4Q5H9R4 360 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 CTSL3PQ5NE16 218 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 FRG2Q64ET8 278 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 ATL3Q6DD88 541 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 FAM109BQ6ICB4 259 aaPredicted RBP4.27□□□□□ -1.73
C11orf54-213ENST00000533585 OR7E24Q6IFN5 339 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 FUT10Q6P4F1 479 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 NAPRTQ6XQN6 538 aa4.27□□□□□ -1.73
C11orf54-213ENST00000533585 RBM44Q6ZP01 1051 aaKnown RBP4.27□□□□□ -1.73
C11orf54-213ENST00000533585 ANKRD33Q7Z3H0 272 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms