RNA–Protein interactions for RNA: ENST00000532751.1

PTPRK-222, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 4

Gene PTPRK, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-222ENST00000532751 DOCK10Q96BY6 2186 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 NSG1A0A0A6YYJ2 146 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 COPEO14579 308 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 OR7A17O14581 309 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 TBX6O95947 436 aaPredicted RBP20.71■□□□□ 0.91
PTPRK-222ENST00000532751 ITGA3P26006 1051 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 SOX8P57073 446 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 HERVK_113P63132 956 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 CCDC153Q494R4 210 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 TMEM35AQ53FP2 167 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 ABHD17CQ6PCB6 329 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 SH2D5Q6ZV89 423 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 ASB18Q6ZVZ8 466 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 CA13Q8N1Q1 262 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 PLPP5Q8NEB5 264 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 OR52B6Q8NGF0 335 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 ZNF483Q8TF39 744 aaPredicted RBP20.71■□□□□ 0.91
PTPRK-222ENST00000532751 NSUN5Q96P11 429 aaKnown RBP20.71■□□□□ 0.91
PTPRK-222ENST00000532751 KCNC2Q96PR1 638 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 F2RL3Q96RI0 385 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 SERINC2Q96SA4 455 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 ERVK-6Q9BXR3 956 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 RBCK1Q9BYM8 510 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 MLXIPLQ9NP71 852 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 RIC8BQ9NVN3 520 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 ZNF451Q9Y4E5 1061 aa20.71■□□□□ 0.91
PTPRK-222ENST00000532751 LOC102723996A0A087X1L8 192 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 A0A1W2PQ72 361 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 FOXO6A8MYZ6 492 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 B8ZZF3 427 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 DLX3O60479 287 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 CDC123O75794 336 aaPredicted RBP20.7■□□□□ 0.9
PTPRK-222ENST00000532751 SUPT7LO94864 414 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 OTCP00480 354 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 TGFB1P01137 390 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 COX6A1P12074 109 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 KRT4P19013 534 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 CRHR1P34998 444 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 MTTPP55157 894 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 MYBPC3Q14896 1274 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 MILR1Q7Z6M3 343 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 HUS1BQ8NHY5 278 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 ADAMTS18Q8TE60 1221 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 CCDC126Q96EE4 140 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 QRFPRQ96P65 431 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 CDK15Q96Q40 435 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 TBCDQ9BTW9 1192 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 NUDT9Q9BW91 350 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 ZNF160Q9HCG1 818 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 ZBTB26Q9HCK0 441 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 LANCL2Q9NS86 450 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 PLAAQ9Y263 795 aa20.7■□□□□ 0.9
PTPRK-222ENST00000532751 IGHV1-45A0A0A0MS14 117 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 MASP2O00187 686 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 B4GALT2O60909 372 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 DNAJB6O75190 326 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 ALPPP05187 535 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 MYL2P10916 166 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 NR1D1P20393 614 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 IMPDH1P20839 514 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 CLCQ05315 142 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 SLC18A2Q05940 514 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 TRAF3Q13114 568 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 RAPSNQ13702 412 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 RCN2Q14257 317 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 ZRSR2Q15696 482 aaKnown RBP20.69■□□□□ 0.9
PTPRK-222ENST00000532751 AP5B1Q2VPB7 878 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 ZNF678Q5SXM1 525 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 DEPDC1Q5TB30 811 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 VWA5B1Q5TIE3 1220 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 KHDRBS2Q5VWX1 349 aaKnown RBP20.69■□□□□ 0.9
PTPRK-222ENST00000532751 TTC19Q6DKK2 380 aaPredicted RBP20.69■□□□□ 0.9
PTPRK-222ENST00000532751 CPEB2Q7Z5Q1 589 aaKnown RBP20.69■□□□□ 0.9
PTPRK-222ENST00000532751 PTRH1Q86Y79 214 aaKnown RBP20.69■□□□□ 0.9
PTPRK-222ENST00000532751 HPS6Q86YV9 775 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 PARP9Q8IXQ6 854 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 SHISA5Q8N114 240 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 C4orf33Q8N1A6 199 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 CCDC63Q8NA47 563 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 MTERF1Q99551 399 aaKnown RBP20.69■□□□□ 0.9
PTPRK-222ENST00000532751 DMRT3Q9NQL9 472 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 LGALS13Q9UHV8 139 aa20.69■□□□□ 0.9
PTPRK-222ENST00000532751 K7EM74 188 aa20.68■□□□□ 0.9
PTPRK-222ENST00000532751 SH3BGRLO75368 114 aa20.68■□□□□ 0.9
PTPRK-222ENST00000532751 PTX3P26022 381 aaPredicted RBP20.68■□□□□ 0.9
PTPRK-222ENST00000532751 CERS1P27544 350 aa20.68■□□□□ 0.9
PTPRK-222ENST00000532751 RAP1GDS1P52306 607 aa20.68■□□□□ 0.9
PTPRK-222ENST00000532751 EFNA3P52797 238 aa20.68■□□□□ 0.9
PTPRK-222ENST00000532751 PRKAA2P54646 552 aa20.68■□□□□ 0.9
PTPRK-222ENST00000532751 CDH13P55290 713 aa20.68■□□□□ 0.9
PTPRK-222ENST00000532751 RAB38P57729 211 aa20.68■□□□□ 0.9
PTPRK-222ENST00000532751 AP2B1P63010 937 aa20.68■□□□□ 0.9
PTPRK-222ENST00000532751 RHAGQ02094 409 aa20.68■□□□□ 0.9
PTPRK-222ENST00000532751 KLRB1Q12918 225 aa20.68■□□□□ 0.9
PTPRK-222ENST00000532751 NSDHLQ15738 373 aa20.68■□□□□ 0.9
PTPRK-222ENST00000532751 GGTA1PQ4G0N0 100 aa20.68■□□□□ 0.9
PTPRK-222ENST00000532751 C10orf62Q5T681 223 aaPredicted RBP20.68■□□□□ 0.9
PTPRK-222ENST00000532751 QSOX2Q6ZRP7 698 aa20.68■□□□□ 0.9
PTPRK-222ENST00000532751 RPS27LQ71UM5 84 aaKnown RBP20.68■□□□□ 0.9
PTPRK-222ENST00000532751 OR4F6Q8NGB9 312 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms