RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 RBFAQ8N0V3 343 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 OR2T29Q8NH02 315 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 FRS2Q8WU20 508 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 QRFPRQ96P65 431 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 LINC00597Q9H2U6 94 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 GPN1Q9HCN4 374 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 EIF2B3Q9NR50 452 aaKnown RBP6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 DPP7Q9UHL4 492 aa6.56□□□□□ -1.36
TGFBR3-209ENST00000532540 hCG_1807616A0A1W2PRN6 198 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CIB4A0PJX0 185 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 STX11O75558 287 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 FHP07954 510 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 RPS17P08708 135 aaKnown RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF250P15622 560 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 FPR1P21462 350 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 LHCGRP22888 699 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 FSHRP23945 695 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 HLA-DMAP28067 261 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 SSTR2P30874 369 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 NOS2P35228 1153 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 TGFBR2P37173 567 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 GNPDA1P46926 289 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 OR4D2P58180 307 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 SLC25A11Q02978 314 aaKnown RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 ST3GAL4Q11206 333 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 BAMBIQ13145 260 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CRTC2Q53ET0 693 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 XAF1Q6GPH4 301 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 RTL4Q6ZR62 310 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 C15orf39Q6ZRI6 1047 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 SH2D5Q6ZV89 423 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF367Q7RTV3 350 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 TCTE3Q8IZS6 198 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 WDTC1Q8N5D0 677 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 WDSUB1Q8N9V3 476 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 OR7D4Q8NG98 312 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 OR52K2Q8NGK3 314 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 OR2T35Q8NGX2 323 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 PCDH19Q8TAB3 1148 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 GPR151Q8TDV0 419 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CSGALNACT1Q8TDX6 532 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 SORCS1Q8WY21 1168 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 KAT2AQ92830 837 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 COQ8BQ96D53 544 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 DCLRE1CQ96SD1 692 aaKnown RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 BCO2Q9BYV7 579 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 ABCG8Q9H221 673 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CWH43Q9H720 699 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CD300AQ9UGN4 299 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CYB5R1Q9UHQ9 305 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 PRKAB1Q9Y478 270 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 PCDHB14Q9Y5E9 798 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 VCANP13611 3396 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 MICAL3Q7RTP6 2002 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CABIN1Q9Y6J0 2220 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 A0A1B0GVI7 797 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 SMLR1H3BR10 107 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 MLYCDO95822 493 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 HLA-EP13747 358 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 S100A2P29034 98 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 PXNP49023 591 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 PTPN5P54829 565 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 RAB2AP61019 212 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 DSC1Q08554 894 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 LAPTM4AQ15012 233 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 LRRN1Q6UXK5 716 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 C3P1Q6ZMU1 363 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 C17orf107Q6ZR85 190 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 MILR1Q7Z6M3 343 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 TSPYL5Q86VY4 417 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CFAP206Q8IYR0 622 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CRYBG2Q8N1P7 616 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CPA6Q8N4T0 437 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 OR5J2Q8NH18 312 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 SERPINB11Q96P15 392 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 ACOX2Q99424 681 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 TMEM175Q9BSA9 504 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 B3GNT4Q9C0J1 378 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 SLIRPQ9GZT3 109 aaKnown RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 C3orf14Q9HBI5 128 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 TMEM138Q9NPI0 162 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 PIGVQ9NUD9 493 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 TLR6Q9Y2C9 796 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CBY1Q9Y3M2 126 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF451Q9Y4E5 1061 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 A8MT66 165 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 MPZL2O60487 215 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 SEC22BO75396 215 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CPSF4O95639 269 aaKnown RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 F7P08709 466 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 HOXB8P17481 243 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 NFKB1P19838 968 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 S100PP25815 95 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 MATKP42679 507 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 SOX9P48436 509 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 FGL1Q08830 312 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 CBLBQ13191 982 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 GPRC6AQ5T6X5 926 aa6.55□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF691Q5VV52 312 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms